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L3_130_000M1_scaffold_872

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000M1_scaffold_872_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(110..664)
DNA (555bp) protein (185aa)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QKC6_9FIRM
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:ERK41753.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
fumarate hydratase subunit B
L3_130_000M1_scaffold_872_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(681..1526)
DNA (846bp) protein (282aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.2)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PDI2_9FIRM
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:ERK41754.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_130_000M1_scaffold_872_3
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1738..2991)
DNA (1254bp) protein (418aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Arginine deiminase n=1 Tax=Roseburia sp. CAG:50 RepID=R5TLK8_9FIRM
arcA; arginine deiminase
L3_130_000M1_scaffold_872_4
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3034..4374)
DNA (1341bp) protein (447aa)
MATE efflux family protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PC80_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:ERK41756.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Na+-driven multidrug efflux pump
L3_130_000M1_scaffold_872_5
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4665..5480
DNA (816bp) protein (272aa)
Predicted transcriptional regulators n=2 Tax=Clostridiales RepID=R5U586_9FIRM
Predicted transcriptional regulators {ECO:0000313|EMBL:CCZ64237.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Predicted transcriptional regulators
L3_130_000M1_scaffold_872_6
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5517..6398)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TZ21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64236.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
glycoside hydrolase family 43
L3_130_000M1_scaffold_872_7
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6415..7773)
DNA (1359bp) protein (453aa)
Glucuronide permease n=1 Tax=Roseburia sp. CAG:50 RepID=R5TEZ9_9FIRM
Glucuronide permease {ECO:0000313|EMBL:CCZ64235.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
glucuronide permease
L3_130_000M1_scaffold_872_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7956..9023
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TLK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64234.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
L3_130_000M1_scaffold_872_9
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9014..10183)
DNA (1170bp) protein (390aa)
Cation diffusion facilitator family transporter n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QSN9_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ERK41762.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
cation diffusion facilitator family transporter
L3_130_000M1_scaffold_872_10
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10660..11325
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TXI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63701.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_872_11
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11461..12435
DNA (975bp) protein (325aa)
pta; phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=2 Tax=Clostridiales RepID=U2PDJ3_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:ERK41764.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_130_000M1_scaffold_872_12
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12790..13164)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NUP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK41765.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_130_000M1_scaffold_872_13
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13168..14073)
DNA (906bp) protein (302aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2PC89_9FIRM
Precorrin-6B methylase 2 {ECO:0000313|EMBL:CCZ65251.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
CobL; precorrin-6B methylase 2
Displaying 13 items

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