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L3_130_000M1_scaffold_937

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_000M1_scaffold_937_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..168
DNA (168bp) protein (56aa)
Transporter n=2 Tax=Clostridiales RepID=U2QRU6_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Na+-dependent transporter of the SNF family
L3_130_000M1_scaffold_937_2
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(410..1366)
DNA (957bp) protein (319aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Roseburia sp. CAG:182 RepID=R7R152_9FIRM
L3_130_000M1_scaffold_937_3
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1369..2106)
DNA (738bp) protein (246aa)
Nitroreductase (EC:1.-.-.-)
Nitroreductase family protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U4J6_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:CCZ64002.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_130_000M1_scaffold_937_4
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2108..3430)
DNA (1323bp) protein (441aa)
Transporter n=1 Tax=Blautia sp. CAG:52 RepID=R6G9A8_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
Na+-dependent transporters of the SNF family
L3_130_000M1_scaffold_937_5
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3557..4582)
DNA (1026bp) protein (342aa)
Threonine aldolase (EC:4.1.2.5)
Beta-eliminating lyase n=1 Tax=Clostridium sp. CAG:510 RepID=R6C7R1_9CLOT
Beta-eliminating lyase {ECO:0000313|EMBL:CDA67461.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L3_130_000M1_scaffold_937_6
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4910..6514)
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Roseburia sp. CAG:50 RepID=R5TEF4_9FIRM
L3_130_000M1_scaffold_937_7
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6816..7469)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TL14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63999.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_130_000M1_scaffold_937_8
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7466..8317)
DNA (852bp) protein (284aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q487_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK51196.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
ABC transporter ATP-binding protein
L3_130_000M1_scaffold_937_9
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8336..8710)
DNA (375bp) protein (125aa)
GntR family transcriptional regulator n=1 Tax=Roseburia sp. CAG:50 RepID=R5U4J4_9FIRM
GntR family transcriptional regulator {ECO:0000313|EMBL:CCZ63997.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
GntR family transcriptional regulator
L3_130_000M1_scaffold_937_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8995..11157)
DNA (2163bp) protein (721aa)
amino acid-binding domain sensor hybrid histidine kinase (EC:2.7.13.3)
Response regulator receiver domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCQ4_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEC89451.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_130_000M1_scaffold_937_11
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11402..12595)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RKL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK51252.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L3_130_000M1_scaffold_937_12
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12582..13079)
DNA (498bp) protein (166aa)
Sigma-70 region 2 n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RCD6_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:ERK51253.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
RNA polymerase sigma factor, sigma-70 family
Displaying 12 items

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