ggKbase home page

L3_130_120G1_scaffold_197

Search features with annotation key words

Displaying items 1-30 of 73 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_120G1_scaffold_197_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(493..1578)
DNA (1086bp) protein (362aa)
Spore germination protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQB0_9FIRM
Spore germination protein {ECO:0000313|EMBL:EHM51674.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
spore germination protein KB
L3_130_120G1_scaffold_197_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1611..2705)
DNA (1095bp) protein (365aa)
Germination protein, Ger(X)C family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQA9_9FIRM
Germination protein, Ger(X)C family {ECO:0000313|EMBL:EHM51673.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
germination protein Ger(x)C
L3_130_120G1_scaffold_197_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2702..4222)
DNA (1521bp) protein (507aa)
Phage tail component protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57588.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spore germination protein KA
L3_130_120G1_scaffold_197_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4450..4950
DNA (501bp) protein (167aa)
Respiratory-chain NADH dehydrogenase subunit n=3 Tax=Clostridiales RepID=G9YQA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27428.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
NADH dehydrogenase (ubiquinone) 24 kDa subunit
L3_130_120G1_scaffold_197_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4963..6228
DNA (1266bp) protein (422aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
HymB family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ASD8_9CLOT
HymB family protein {ECO:0000313|EMBL:ERI68734.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_130_120G1_scaffold_197_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6225..7976
DNA (1752bp) protein (584aa)
Putative ferredoxin hydrogenase HydA1 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BA95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57591.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative iron hydrogenase
L3_130_120G1_scaffold_197_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8033..9097)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27431.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_130_120G1_scaffold_197_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9606..10991
DNA (1386bp) protein (462aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Pyridoxal-phosphate dependent TrpB-like enzyme n=2 Tax=Clostridiales RepID=H1CJ99_9FIRM
hypothetical protein
L3_130_120G1_scaffold_197_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11077..11805
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YXP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27433.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_130_120G1_scaffold_197_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11887..14532)
DNA (2646bp) protein (882aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXP1_9FIRM
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EHM37173.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
MgtA4; cation transport ATPase
L3_130_120G1_scaffold_197_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14618..15307)
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=2 Tax=Clostridiales RepID=G9YXP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27436.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
response regulator receiver protein
L3_130_120G1_scaffold_197_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15310..15669)
DNA (360bp) protein (120aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YXP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27437.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
DNA-binding protein
L3_130_120G1_scaffold_197_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15809..17050)
DNA (1242bp) protein (414aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJA5_9FIRM
PpiC-type peptidyl-prolyl cis-trans isomerase
L3_130_120G1_scaffold_197_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17548..21060)
DNA (3513bp) protein (1171aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
mfd; transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXP6_9FIRM
L3_130_120G1_scaffold_197_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21143..21598)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27371.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
spermine/spermidine acetyltransferase
L3_130_120G1_scaffold_197_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21609..22205)
DNA (597bp) protein (199aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJA9_9FIRM
L3_130_120G1_scaffold_197_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22280..23239)
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
prs; phosphoribosyl pyrophosphate synthetase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=2 Tax=Clostridiales RepID=G9YXP9_9FIRM
L3_130_120G1_scaffold_197_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23299..24492)
DNA (1194bp) protein (398aa)
putative glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157)
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase n=2 Tax=Clostridiales RepID=H1CJB1_9FIRM
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase {ECO:0000313|EMBL:EHO27374.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_130_120G1_scaffold_197_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24707..25168)
DNA (462bp) protein (154aa)
HD domain protein n=3 Tax=Clostridiales RepID=G9YXQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27375.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_130_120G1_scaffold_197_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25391..25780
DNA (390bp) protein (130aa)
Transcriptional regulator, GntR family n=3 Tax=Clostridiales RepID=G9YXQ3_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERI68885.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
transcriptional regulator, GntR family
L3_130_120G1_scaffold_197_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25773..26675
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57558.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative ABC transporter ATP-binding protein
L3_130_120G1_scaffold_197_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26629..28566
DNA (1938bp) protein (646aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27378.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_130_120G1_scaffold_197_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28741..30000
DNA (1260bp) protein (420aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B9P0_9CLOT
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:ERI68920.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_130_120G1_scaffold_197_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30128..30781
DNA (654bp) protein (218aa)
putative CoA-transferase alpha subunit (EC:2.8.3.-)
3-oxoacid CoA-transferase, A subunit n=2 Tax=Clostridiales RepID=H1CJB7_9FIRM
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:EHO27380.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_130_120G1_scaffold_197_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30781..31440
DNA (660bp) protein (220aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.8)
Butyrate--acetoacetate CoA-transferase subunit B n=3 Tax=Clostridiales RepID=G9YXQ8_9FIRM
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:EHO27381.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_130_120G1_scaffold_197_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31514..31720)
DNA (207bp) protein (69aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YXQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27382.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_130_120G1_scaffold_197_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32052..32543)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CJC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27383.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
L3_130_120G1_scaffold_197_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32540..33421)
DNA (882bp) protein (294aa)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs (EC:1.17.1.4)
FAD binding domain in molybdopterin dehydrogenase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57565.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_130_120G1_scaffold_197_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33423..35723)
DNA (2301bp) protein (767aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27385.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_130_120G1_scaffold_197_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35958..36677
DNA (720bp) protein (240aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CI30_9CLOT
LytTr DNA-binding domain protein {ECO:0000313|EMBL:ERI68912.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
LytTr DNA-binding domain-containing protein
Displaying items 1-30 of 73 in total

View Taxonomy