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L3_130_369G1_scaffold_13

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Displaying items 1-30 of 235 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_130_369G1_scaffold_13_1
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1..108)
DNA (108bp) protein (36aa)
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein n=1 Tax=Clostridium difficile CD69 RepID=T3A6V3_CLODI
Glyoxalase family protein {ECO:0000313|EMBL:ERK46832.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
L3_130_369G1_scaffold_13_2
Enterococcus durans, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(138..464)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Enterococcus durans ATCC 6056 RepID=S0JW86_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOU19944.1}; TaxID=1140001 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus durans ATCC 6056.;"
hypothetical protein
L3_130_369G1_scaffold_13_3
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(909..1484)
DNA (576bp) protein (192aa)
Sortase and related acyltransferases (EC:2.3.1.-)
Acetyltransferase, GNAT family n=1 Tax=Clostridium sp. SS2/1 RepID=B0P0X2_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDS21498.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_130_369G1_scaffold_13_4
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1481..2413)
DNA (933bp) protein (311aa)
LysR substrate binding domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N992_CLOSV
Transcriptional regulator {ECO:0000313|EMBL:EXG86115.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
LysR substrate binding domain family protein
L3_130_369G1_scaffold_13_5
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2502..3071
DNA (570bp) protein (190aa)
Chromate transport protein n=1 Tax=Blautia sp. CAG:52 RepID=R6GAS6_9FIRM
Chromate transporter {ECO:0000313|EMBL:KEZ89432.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Chromate transport protein ChrA
L3_130_369G1_scaffold_13_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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3068..3625
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58389.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Chromate transport protein ChrA
L3_130_369G1_scaffold_13_7
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3714..4778)
DNA (1065bp) protein (355aa)
ApbE family protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAE2_9CLOT
ApbE family protein {ECO:0000313|EMBL:EEG31582.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
ApbE family lipoprotein
L3_130_369G1_scaffold_13_8
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4799..8380)
DNA (3582bp) protein (1194aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2M0_9FIRM
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDC17690.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_130_369G1_scaffold_13_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8407..9396)
DNA (990bp) protein (330aa)
Exonuclease family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DDM1_CLODI
Exonuclease family protein {ECO:0000313|EMBL:EQF24937.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
putative exonuclease
L3_130_369G1_scaffold_13_10
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9473..10852)
DNA (1380bp) protein (460aa)
Trypsin n=1 Tax=Coprococcus comes CAG:19 RepID=R6LIG2_9FIRM
Trypsin {ECO:0000313|EMBL:CDB85615.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L3_130_369G1_scaffold_13_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11060..13108
DNA (2049bp) protein (683aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37762.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Cell division protein FtsI/penicillin-binding protein 2
L3_130_369G1_scaffold_13_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13327..14601
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58036.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Protein of unknown function (DUF1576).
L3_130_369G1_scaffold_13_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(14596..15171)
DNA (576bp) protein (192aa)
Phosphatidylglycerophosphate synthase (EC:2.7.8.5)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R0F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42333.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_130_369G1_scaffold_13_14
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15250..15924
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6TK24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC59082.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
Uncharacterised protein family (UPF0153).
L3_130_369G1_scaffold_13_15
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15939..16385)
DNA (447bp) protein (149aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=3 Tax=Lachnospiraceae RepID=E9RU05_9FIRM
L3_130_369G1_scaffold_13_16
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16518..17267
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2Z560_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65112.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L3_130_369G1_scaffold_13_17
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17264..17908)
DNA (645bp) protein (215aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NAN2_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08190.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_130_369G1_scaffold_13_18
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18003..18953)
DNA (951bp) protein (317aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.- 5.4.99.12)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6MH07_9FIRM
L3_130_369G1_scaffold_13_19
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18916..19446)
DNA (531bp) protein (177aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Dorea sp. CAG:317 RepID=R6WNW9_9FIRM
L3_130_369G1_scaffold_13_20
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19467..20237)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Dorea sp. 5-2 RepID=R9N968_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79815.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Uncharacterized conserved protein, contains S4-like domain
L3_130_369G1_scaffold_13_21
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20243..20797)
DNA (555bp) protein (185aa)
Cell division protein SepF n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BW72_9CLOT
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L3_130_369G1_scaffold_13_22
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20812..21543)
DNA (732bp) protein (244aa)
Pyridoxal phosphate enzyme, YggS family n=2 Tax=Coprococcus RepID=C0BC65_9FIRM
Pyridoxal phosphate enzyme YggS family {ECO:0000313|EMBL:CDB85208.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
pyridoxal phosphate enzyme, YggS family
L3_130_369G1_scaffold_13_23
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21613..22998)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D9N3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73527.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L3_130_369G1_scaffold_13_24
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23042..23992)
DNA (951bp) protein (317aa)
Radical SAM protein, TIGR01212 family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BW67_9CLOT
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:EEG75869.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
radical SAM protein, TIGR01212 family
L3_130_369G1_scaffold_13_25
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24077..24283
DNA (207bp) protein (69aa)
Putative membrane protein n=1 Tax=Clostridium sp. D5 RepID=F0Z1D5_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EGB92237.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_130_369G1_scaffold_13_26
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24333..25418)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SSI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC58381.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
D-alanyl-D-alanine carboxypeptidase
L3_130_369G1_scaffold_13_27
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25449..25844)
DNA (396bp) protein (132aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MEI9_9FIRM
L3_130_369G1_scaffold_13_28
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25857..26981)
DNA (1125bp) protein (375aa)
Putative rod shape-determining protein RodA n=2 Tax=Coprococcus RepID=C0BC58_9FIRM
Putative rod shape-determining protein RodA {ECO:0000313|EMBL:CDB85202.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Bacterial cell division membrane protein
L3_130_369G1_scaffold_13_29
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26978..27208)
DNA (231bp) protein (77aa)
Cell division topological specificity factor MinE n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B936_9FIRM
Cell division topological specificity factor {ECO:0000256|SAAS:SAAS00085645}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Septum formation topological specificity factor MinE.
L3_130_369G1_scaffold_13_30
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27222..28013)
DNA (792bp) protein (264aa)
Site-determining protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B937_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
septum site-determining protein MinD
Displaying items 1-30 of 235 in total

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