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L3_131_000M1_scaffold_1249

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_1249_1
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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173..817
DNA (645bp) protein (215aa)
Membrane protein, MarC family n=8 Tax=Bacteroides RepID=C3PWL3_9BACE
antibiotic resistance protein MarC
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L3_131_000M1_scaffold_1249_2
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(898..1917)
DNA (1020bp) protein (340aa)
GroES-like protein n=4 Tax=Bacteroides RepID=C3PWL2_9BACE
sorbitol dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:EIY39152.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
L3_131_000M1_scaffold_1249_3
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1941..3200)
DNA (1260bp) protein (420aa)
L-fucose:H+ symporter permease n=6 Tax=Bacteroides RepID=C3RGI0_9BACE
major facilitator transporter
L-fucose:H+ symporter permease {ECO:0000313|EMBL:CDB36331.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_131_000M1_scaffold_1249_4
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3227..4153)
DNA (927bp) protein (309aa)
Uncharacterized protein n=3 Tax=Bacteroides dorei RepID=I9FYZ5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY34968.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
amidohydrolase
L3_131_000M1_scaffold_1249_5
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4168..5100)
DNA (933bp) protein (311aa)
Oxidoreductase, aldo/keto reductase family protein n=8 Tax=Bacteroides RepID=C3PWK9_9BACE
aldo/keto reductase
Uncharacterized protein {ECO:0000313|EMBL:EIY39155.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
L3_131_000M1_scaffold_1249_6
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5218..6078)
DNA (861bp) protein (287aa)
Transcriptional regulator, AraC family n=6 Tax=Bacteroides RepID=C3PWK8_9BACE
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AII64784.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_131_000M1_scaffold_1249_7
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6389..9595
DNA (3207bp) protein (1069aa)
TonB-dependent receptor plug n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HH87_9BACE
TonB-dependent receptor plug {ECO:0000313|EMBL:CDB36335.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
TonB-dependent receptor plug
L3_131_000M1_scaffold_1249_8
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9608..11044
DNA (1437bp) protein (479aa)
RagB/SusD domain-containing protein n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HT10_9BACE
RagB/SusD domain-containing protein {ECO:0000313|EMBL:CDB36336.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
RagB/SusD domain-containing protein
L3_131_000M1_scaffold_1249_9
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10994..11110)
DNA (117bp) protein (39aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I8VX27_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY38218.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
L3_131_000M1_scaffold_1249_10
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11183..11554)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I9FWK5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY38219.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
hypothetical protein
L3_131_000M1_scaffold_1249_11
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11566..12063)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I8WHM9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY37292.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
hypothetical protein
L3_131_000M1_scaffold_1249_12
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12223..12396)
DNA (174bp) protein (58aa)
Uncharacterized protein n=3 Tax=Bacteroides dorei RepID=I8VU52_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY37293.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
L3_131_000M1_scaffold_1249_13
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12403..13329)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I9FU68_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY37294.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
transposase
L3_131_000M1_scaffold_1249_14
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14158..14418
DNA (261bp) protein (87aa)
Glycosyl hydrolase family 43 n=1 Tax=Bacteroides dorei CAG:222 RepID=R6IEB2_9BACE
Glycosyl hydrolase family 43 {ECO:0000313|EMBL:CDB36337.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_131_000M1_scaffold_1249_15
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14381..15400
DNA (1020bp) protein (340aa)
Glycosyl hydrolase family 43 n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HEY5_9BACE
Glycosyl hydrolase family 43 {ECO:0000313|EMBL:CDB36338.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
glycoside hydrolase
L3_131_000M1_scaffold_1249_16
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15410..16486
DNA (1077bp) protein (359aa)
Polygalacturonase family GH28 n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HQ56_9BACE
Polygalacturonase family GH28 {ECO:0000313|EMBL:CDB36339.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
glycoside hydrolase
L3_131_000M1_scaffold_1249_17
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16496..16807
DNA (312bp) protein (104aa)
polygalacturonase (EC:3.2.1.15)
Polygalacturonase family GH28 n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HQ56_9BACE
Polygalacturonase family GH28 {ECO:0000313|EMBL:CDB36339.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_131_000M1_scaffold_1249_18
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16820..18337
DNA (1518bp) protein (506aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HH92_9BACE
Alpha-L-fucosidase {ECO:0000313|EMBL:CDB36340.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_131_000M1_scaffold_1249_19
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18349..18810
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HT14_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB36341.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L-rhamnose mutarotase
L3_131_000M1_scaffold_1249_20
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19005..20033)
DNA (1029bp) protein (343aa)
Peptidase, S41 family n=5 Tax=Bacteroides RepID=C3PWK3_9BACE
peptidase S41
Peptidase, S41 family {ECO:0000313|EMBL:EEO59702.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L3_131_000M1_scaffold_1249_21
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20042..20887)
DNA (846bp) protein (282aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3PWK2_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ22606.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
L3_131_000M1_scaffold_1249_22
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20891..23584)
DNA (2694bp) protein (898aa)
DNA gyrase/topoisomerase IV, A subunit n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3RGH0_9BACE
DNA gyrase/topoisomerase IV, A subunit {ECO:0000313|EMBL:EEO48129.1}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
DNA topoisomerase IV subunit A
L3_131_000M1_scaffold_1249_23
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


23736..25277
DNA (1542bp) protein (514aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
Glycine--tRNA ligase n=6 Tax=Bacteroides RepID=B6VST9_9BACE
glycyl-tRNA synthetease
L3_131_000M1_scaffold_1249_24
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25291..25929
DNA (639bp) protein (213aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
Peptidyl-prolyl cis-trans isomerase n=7 Tax=Bacteroides RepID=C3PWJ9_9BACE
peptidylprolyl isomerase
L3_131_000M1_scaffold_1249_25
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26443..27453)
DNA (1011bp) protein (337aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
Aspartate-semialdehyde dehydrogenase n=13 Tax=root RepID=A6KWW9_BACV8
aspartate-semialdehyde dehydrogenase
Displaying 25 items

View Taxonomy