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L3_131_000M1_scaffold_196

Search features with annotation key words

Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_196_1
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(94..810)
DNA (717bp) protein (239aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Clostridium termitidis CT1112 RepID=S0FUA2_9CLOT
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EMS73896.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
radc, ribosomal RNA adenine dimethylase
L3_131_000M1_scaffold_196_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1392..2057
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94524.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Rad3-related DNA helicases
L3_131_000M1_scaffold_196_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2030..2218
DNA (189bp) protein (63aa)
Rad3-related DNA helicases n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQ01_9FIRM
Rad3-related DNA helicases
Rad3-related DNA helicases {ECO:0000313|EMBL:CBL11445.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_196_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2257..3321
DNA (1065bp) protein (355aa)
Rad3-related DNA helicases n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQ01_9FIRM
Rad3-related DNA helicases
Rad3-related DNA helicases {ECO:0000313|EMBL:CBL08953.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_196_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3388..3657
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7GDA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA53910.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_131_000M1_scaffold_196_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3608..5476
DNA (1869bp) protein (623aa)
Resolvase, N-terminal domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSD9_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEG94527.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_131_000M1_scaffold_196_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5479..7215
DNA (1737bp) protein (579aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQ03_9FIRM
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL08955.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_131_000M1_scaffold_196_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7212..8792
DNA (1581bp) protein (527aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVQ9_9FIRM
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL11449.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_131_000M1_scaffold_196_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9003..9422
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7GD96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56930.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_131_000M1_scaffold_196_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9537..10100
DNA (564bp) protein (188aa)
ADP-ribose pyrophosphatase n=3 Tax=Roseburia RepID=D4KVR0_9FIRM
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CBL11450.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_196_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10097..11506)
DNA (1410bp) protein (470aa)
Putative efflux protein, MATE family n=3 Tax=Roseburia intestinalis RepID=D4KVR1_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL11451.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_196_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11654..13990
DNA (2337bp) protein (779aa)
Ferrous iron transporter FeoB n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVR2_9FIRM
ferrous iron transporter FeoB
Ferrous iron transporter FeoB {ECO:0000313|EMBL:CBL11452.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_196_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14091..14729
DNA (639bp) protein (213aa)
Predicted xylanase/chitin deacetylase n=3 Tax=Roseburia intestinalis RepID=D4KQ08_9FIRM
Predicted xylanase/chitin deacetylase
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CBL08960.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_196_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14937..15890
DNA (954bp) protein (318aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=2 Tax=Roseburia intestinalis RepID=D4KQ09_9FIRM
DnaJ-class molecular chaperone with C-terminal Zn finger domain
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:CBL08961.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_196_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15957..17324)
DNA (1368bp) protein (456aa)
Putative SpoVB related membrane protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B7L8_9FIRM
Putative SpoVB related membrane protein {ECO:0000313|EMBL:CDA56924.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Na+-driven multidrug efflux pump
L3_131_000M1_scaffold_196_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17396..18556
DNA (1161bp) protein (387aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes n=3 Tax=Roseburia RepID=D4KQ10_9FIRM
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes {ECO:0000313|EMBL:CDA56923.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_131_000M1_scaffold_196_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18776..19426
DNA (651bp) protein (217aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CBL11460.1}; EC=3.1.3.18 {ECO:0000313|EMBL:CBL11460.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVS0_9FIRM
L3_131_000M1_scaffold_196_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19608..20477
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B7L1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56919.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_131_000M1_scaffold_196_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20529..22169)
DNA (1641bp) protein (547aa)
ATPase components of ABC transporters with duplicated ATPase domains n=4 Tax=Roseburia RepID=D4KQ14_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CBL11461.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_196_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22497..25637
DNA (3141bp) protein (1047aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQ15_9FIRM
diguanylate cyclase (GGDEF) domain
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDA56916.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_131_000M1_scaffold_196_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25800..29294
DNA (3495bp) protein (1165aa)
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159, ECO:0000313|EMBL:CBL08968.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Pyruvate-flavodoxin oxidoreductase n=4 Tax=Roseburia RepID=D4KQ16_9FIRM
L3_131_000M1_scaffold_196_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29711..31324
DNA (1614bp) protein (538aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=2 Tax=Roseburia RepID=C7GD82_9FIRM
L3_131_000M1_scaffold_196_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31348..31605
DNA (258bp) protein (86aa)
Phosphotransferase System HPr (HPr) Family n=4 Tax=Roseburia RepID=D4KQ18_9FIRM
Phosphotransferase System HPr (HPr) Family
Phosphocarrier, HPr family {ECO:0000313|EMBL:EEV00227.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_131_000M1_scaffold_196_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31844..32677
DNA (834bp) protein (278aa)
Transcriptional antiterminator, BglG family n=3 Tax=Roseburia intestinalis RepID=D4KQ19_9FIRM
transcriptional antiterminator, BglG family
Transcriptional antiterminator, BglG family {ECO:0000313|EMBL:CBL11467.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_196_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32713..33195
DNA (483bp) protein (161aa)
PTS system IIA component, Glc family (TC 4.A.1) n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQ20_9FIRM
PTS system IIA component, Glc family (TC 4.A.1)
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EEV00225.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_131_000M1_scaffold_196_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33352..34824
DNA (1473bp) protein (491aa)
PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2) n=2 Tax=Roseburia RepID=D4KQ21_9FIRM
PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2)
PTS system N-acetylglucosamine-specific IIB component Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component Glc family (TC 4.A.1.1.2) {ECO:0000313|EMBL:CDA56906.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_131_000M1_scaffold_196_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35072..35938
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GD76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00222.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_131_000M1_scaffold_196_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36060..37718
DNA (1659bp) protein (553aa)
Inorganic pyrophosphatase/exopolyphosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase/exopolyphosphatase n=3 Tax=Roseburia RepID=D4KQ22_9FIRM
Inorganic pyrophosphatase/exopolyphosphatase {ECO:0000313|EMBL:CDA56903.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_131_000M1_scaffold_196_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37767..38615)
DNA (849bp) protein (283aa)
AraC-type DNA-binding domain-containing proteins n=3 Tax=Roseburia RepID=D4KVT2_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CDA56901.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_131_000M1_scaffold_196_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38875..40059
DNA (1185bp) protein (395aa)
cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-synthase {ECO:0000313|EMBL:CBL11473.1}; EC=2.5.1.48 {ECO:0000313|EMBL:CBL11473.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Cystathionine gamma-synthase n=2 Tax=Roseburia intestinalis RepID=D4KQ24_9FIRM
Displaying items 1-30 of 109 in total

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