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L3_131_000M1_scaffold_221

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_221_1
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..904
DNA (903bp) protein (301aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
DNA-directed RNA polymerase subunit alpha n=3 Tax=Alistipes RepID=I3YM44_ALIFI
L3_131_000M1_scaffold_221_2
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


907..1512
DNA (606bp) protein (202aa)
50S ribosomal protein L17 n=2 Tax=Alistipes RepID=I3YM45_ALIFI
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_221_3
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1786..2874)
DNA (1089bp) protein (363aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YM48_ALIFI
sugar phosphate isomerase/epimerase
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:AFL78066.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_221_4
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2953..4656)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YM49_ALIFI
Uncharacterized protein {ECO:0000313|EMBL:CCZ77124.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_131_000M1_scaffold_221_5
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4681..6225)
DNA (1545bp) protein (515aa)
Ser/Thr phosphatase family protein n=3 Tax=Alistipes RepID=E4MAD9_9BACT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CCZ77123.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
phosphohydrolase
L3_131_000M1_scaffold_221_6
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6245..8056)
DNA (1812bp) protein (604aa)
RagB/SusD family protein n=3 Tax=Alistipes RepID=I3YM51_ALIFI
RagB/SusD family protein {ECO:0000313|EMBL:CCZ77122.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
RagB/SusD family protein
L3_131_000M1_scaffold_221_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8069..11182)
DNA (3114bp) protein (1038aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YM52_ALIFI
SusC/RagA family TonB-linked outer membrane protein
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AFL78070.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_221_8
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11877..13544
DNA (1668bp) protein (556aa)
Ribulokinase {ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|SAAS:SAAS00183333};; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Ribulose kinase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UGI6_9BACT
ribulose kinase
L3_131_000M1_scaffold_221_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13561..14868
DNA (1308bp) protein (436aa)
Sugar phosphate permease n=3 Tax=Alistipes RepID=I3YM55_ALIFI
sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:CCZ77119.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_131_000M1_scaffold_221_10
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14887..16260
DNA (1374bp) protein (458aa)
FAD binding protein n=2 Tax=Alistipes RepID=I3YM56_ALIFI
FAD binding protein
FAD binding protein {ECO:0000313|EMBL:CCZ77118.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_131_000M1_scaffold_221_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16369..17259
DNA (891bp) protein (297aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MAD2_9BACT
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EFR58124.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
metal-dependent hydrolase
L3_131_000M1_scaffold_221_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17275..18585
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YM58_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78076.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_221_13
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18676..19434)
DNA (759bp) protein (253aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Triosephosphate isomerase n=2 Tax=Alistipes RepID=I3YM59_ALIFI
L3_131_000M1_scaffold_221_14
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19478..21199)
DNA (1722bp) protein (574aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=2 Tax=Alistipes RepID=I3YM60_ALIFI
L3_131_000M1_scaffold_221_15
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21412..22059)
DNA (648bp) protein (216aa)
PAP2 family protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MAC8_9BACT
PAP2 family protein {ECO:0000313|EMBL:EFR58138.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
PAP2 superfamily protein
L3_131_000M1_scaffold_221_16
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22205..23710)
DNA (1506bp) protein (502aa)
Putative membrane protein involved in D-alanine export n=2 Tax=Alistipes RepID=I3YM62_ALIFI
D-alanine export membrane protein
Putative membrane protein involved in D-alanine export {ECO:0000313|EMBL:CCZ75769.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_131_000M1_scaffold_221_17
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23707..25314)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UBX7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ75768.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_131_000M1_scaffold_221_18
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25322..26089)
DNA (768bp) protein (256aa)
Putative Zn-dependent protease n=3 Tax=Alistipes RepID=I3YM64_ALIFI
Zn-dependent protease
Putative Zn-dependent protease {ECO:0000313|EMBL:AFL78082.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_221_19
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26093..26842)
DNA (750bp) protein (250aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFR58129.1}; EC=1.1.1.276 {ECO:0000313|EMBL:EFR58129.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Short-chain alcohol dehydrogenase n=3 Tax=Alistipes RepID=I3YM65_ALIFI
short-chain alcohol dehydrogenase
L3_131_000M1_scaffold_221_20
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26919..28163
DNA (1245bp) protein (415aa)
ABC-type transport system, involved in lipoprotein release, permease component n=2 Tax=Alistipes RepID=I3YM66_ALIFI
lipoprotein release ABC transporter permease
ABC-type transport system involved in lipoprotein release permease component {ECO:0000313|EMBL:CCZ75765.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_131_000M1_scaffold_221_21
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28160..28876
DNA (717bp) protein (239aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Demethylmenaquinone methyltransferase n=3 Tax=Alistipes RepID=I3YM67_ALIFI
ubiquinone/menaquinone biosynthesis methyltransferase
L3_131_000M1_scaffold_221_22
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28879..29583
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YM68_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78086.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_221_23
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29583..30053
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V4U7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ75762.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_131_000M1_scaffold_221_24
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30159..30398
DNA (240bp) protein (80aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YM70_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75761.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_131_000M1_scaffold_221_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30548..31159
DNA (612bp) protein (204aa)
Flavin reductase {ECO:0000313|EMBL:EFR58161.1}; EC=1.7.-.- {ECO:0000313|EMBL:EFR58161.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Flavin reductase n=1 Tax=Alistipes sp. HGB5 RepID=E4MAB8_9BACT
multimeric flavodoxin WrbA
L3_131_000M1_scaffold_221_26
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31361..32620
DNA (1260bp) protein (420aa)
Putative DNA modification/repair radical SAM protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UJ75_9BACT
Putative DNA modification/repair radical SAM protein {ECO:0000313|EMBL:CCZ75759.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
DNA modification/repair radical SAM protein
L3_131_000M1_scaffold_221_27
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32626..33387
DNA (762bp) protein (254aa)
Putative DNA metabolism protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MAB5_9BACT
Putative DNA metabolism protein {ECO:0000313|EMBL:EFR58146.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
DNA metabolism protein
L3_131_000M1_scaffold_221_28
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33720..36023)
DNA (2304bp) protein (768aa)
Outer membrane protein/protective antigen OMA87 n=3 Tax=Alistipes RepID=I3YM74_ALIFI
Outer membrane protein/protective antigen OMA87 {ECO:0000313|EMBL:CCZ75757.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
outer membrane protein/protective antigen OMA87
L3_131_000M1_scaffold_221_29
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36007..40881)
DNA (4875bp) protein (1625aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YM75_ALIFI
Uncharacterized protein {ECO:0000313|EMBL:AFL78093.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
hypothetical protein
L3_131_000M1_scaffold_221_30
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41087..42163)
DNA (1077bp) protein (359aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
DNA polymerase IV n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YM76_ALIFI
nucleotidyltransferase/DNA polymerase
Displaying items 1-30 of 77 in total

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