ggKbase home page

L3_131_000M1_scaffold_230

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_230_1
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

215..955
DNA (741bp) protein (247aa)
Potassium channel subunit n=2 Tax=Bacteroides RepID=D7IJH8_9BACE
Potassium channel subunit {ECO:0000313|EMBL:EFI02262.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
potassium channel subunit
L3_131_000M1_scaffold_230_2
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1281..2246)
DNA (966bp) protein (322aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
glutaminase (EC:3.5.1.2)
Glutaminase n=2 Tax=Bacteroides RepID=D7IJH9_9BACE
L3_131_000M1_scaffold_230_3
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2255..3700)
DNA (1446bp) protein (482aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
Glutamate decarboxylase n=2 Tax=Bacteroides RepID=D7IJI0_9BACE
glutamate decarboxylase
L3_131_000M1_scaffold_230_4
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3731..3925
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7L1N8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE81931.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_131_000M1_scaffold_230_5
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3960..4463)
DNA (504bp) protein (168aa)
RNA polymerase sigma-70 factor, ECF subfamily n=3 Tax=Bacteroides RepID=D7IJI1_9BACE
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOR96929.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
RNA polymerase ECF-type sigma factor
L3_131_000M1_scaffold_230_6
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4717..5949
DNA (1233bp) protein (411aa)
Sugar transporter n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7L404_9BACE
Sugar transporter {ECO:0000313|EMBL:CDE81927.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
sugar transporter
L3_131_000M1_scaffold_230_7
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5956..6876
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6ITB2_9BACE
permease
Putative permease {ECO:0000313|EMBL:AAO77674.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_131_000M1_scaffold_230_8
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6953..7345)
DNA (393bp) protein (131aa)
HIT family protein n=4 Tax=Bacteroides RepID=Q8A4N3_BACTN
HIT family protein
HIT family protein {ECO:0000313|EMBL:AAO77673.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_131_000M1_scaffold_230_9
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7398..7862)
DNA (465bp) protein (155aa)
Transcription elongation factor GreA n=5 Tax=Bacteroides RepID=Q8A4N4_BACTN
transcription elongation factor greA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_131_000M1_scaffold_230_10
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8043..9194)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q8A4N5_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR96924.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_131_000M1_scaffold_230_11
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9390..11516
DNA (2127bp) protein (709aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
Polyribonucleotide nucleotidyltransferase n=4 Tax=Bacteroides RepID=PNP_BACTN
polynucleotide phosphorylase
L3_131_000M1_scaffold_230_12
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11658..12218
DNA (561bp) protein (187aa)
RNA polymerase sigma-70 factor expansion family 1 n=3 Tax=Bacteroides RepID=R7KZR2_9BACE
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EOR96922.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
putative RNA polymerase ECF-type sigma factor
L3_131_000M1_scaffold_230_13
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12324..13262
DNA (939bp) protein (313aa)
Putative anti-sigma factor n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7L1S0_9BACE
Putative anti-sigma factor {ECO:0000313|EMBL:CDE81918.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
anti-sigma factor
L3_131_000M1_scaffold_230_14
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13472..16843
DNA (3372bp) protein (1124aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7L3Z4_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CDE81917.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
hypothetical protein
L3_131_000M1_scaffold_230_15
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16862..18505
DNA (1644bp) protein (548aa)
SusD homolog n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7L1M4_9BACE
SusD homolog {ECO:0000313|EMBL:CDE81916.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
hypothetical protein
L3_131_000M1_scaffold_230_16
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19345..19659)
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6ITA3_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI02275.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
L3_131_000M1_scaffold_230_17
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19870..20349
DNA (480bp) protein (160aa)
DNA-binding protein n=3 Tax=Bacteroides RepID=D7IJJ2_9BACE
DNA-binding protein {ECO:0000313|EMBL:EFI02276.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
Helix-turn-helix.
L3_131_000M1_scaffold_230_18
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20379..22130
DNA (1752bp) protein (584aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q8A4P4_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES66059.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_131_000M1_scaffold_230_19
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22440..23501)
DNA (1062bp) protein (354aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase n=3 Tax=Bacteroides RepID=D7IJJ3_9BACE
L3_131_000M1_scaffold_230_20
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23532..24476)
DNA (945bp) protein (315aa)
Phosphate butyryltransferase n=4 Tax=Bacteroides RepID=Q8A4P6_BACTN
phosphate butyryltransferase
Phosphate butyryltransferase {ECO:0000313|EMBL:EOR96911.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_131_000M1_scaffold_230_21
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24656..25462
DNA (807bp) protein (269aa)
Licheninase n=2 Tax=Bacteroides RepID=D7IJJ5_9BACE
Licheninase {ECO:0000313|EMBL:EFI02279.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
beta-glucanase
L3_131_000M1_scaffold_230_22
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25473..26381
DNA (909bp) protein (303aa)
Muramoyltetrapeptide carboxypeptidase n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H6V6_BACT4
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:EOR96909.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
carboxypeptidase
L3_131_000M1_scaffold_230_23
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26468..27448
DNA (981bp) protein (327aa)
Glutamine cyclotransferase-related protein n=2 Tax=Bacteroides RepID=D7IJJ7_9BACE
Glutamine cyclotransferase-related protein {ECO:0000313|EMBL:EFI02281.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
leucine aminopeptidase
L3_131_000M1_scaffold_230_24
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27479..27904
DNA (426bp) protein (142aa)
Fe-S metabolism associated SufE n=5 Tax=Bacteroides RepID=Q8A4Q0_BACTN
hypothetical protein
Fe-S metabolism associated SufE {ECO:0000313|EMBL:CDE75427.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_131_000M1_scaffold_230_25
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28021..28236)
DNA (216bp) protein (72aa)
Transcriptional regulator n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A4Q1_BACTN
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AAO77653.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_131_000M1_scaffold_230_26
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28259..28915)
DNA (657bp) protein (219aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q8A4Q2_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO77652.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_131_000M1_scaffold_230_27
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28928..29731)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H6V1_BACT4
Putative metal-dependent membrane protease {ECO:0000313|EMBL:CDE75424.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
metal-dependent membrane protease
L3_131_000M1_scaffold_230_28
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29781..29870)
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9GZ01_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOR96903.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_131_000M1_scaffold_230_29
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30018..30152
DNA (135bp) protein (45aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I0PZX9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE75423.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_131_000M1_scaffold_230_30
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30095..31030)
DNA (936bp) protein (312aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
Riboflavin biosynthesis protein RibF n=2 Tax=Bacteroides RepID=C6IT91_9BACE
riboflavin biosynthesis protein RibF
Displaying items 1-30 of 76 in total

View Taxonomy