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L3_131_000M1_scaffold_261

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_261_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..574
DNA (573bp) protein (191aa)
GalT Galactose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:KFI42486.1}; EC=2.7.7.12 {ECO:0000313|EMBL:KFI42486.1};; UDP-glucose-hexose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:AGG55587.1}; EC=2.7.7.12 {ECO:0000313|EMBL:AGG55587.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Galactose-1-phosphate uridylyltransferase (Fragment) n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MST8_BIFBI
galT1; galactose-1-phosphate uridylyltransferase
L3_131_000M1_scaffold_261_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

664..1914
DNA (1251bp) protein (417aa)
galK; galactokinase GalK (EC:2.7.1.6)
Galactokinase n=8 Tax=Bifidobacterium RepID=E3ELU1_BIFBS
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_131_000M1_scaffold_261_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2132..3457)
DNA (1326bp) protein (442aa)
Transporter, major facilitator superfamily MFS1, alpha-ketoglutarate permease n=5 Tax=Bifidobacterium RepID=E3ELU2_BIFBS
kgtP; transporter major facilitator superfamily MFS1, alpha-ketoglutarate permease
Transporter, MFS superfamily {ECO:0000313|EMBL:KFI42488.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_131_000M1_scaffold_261_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3834..4106
DNA (273bp) protein (91aa)
UPF0237 protein BBIF_0434 n=8 Tax=Bifidobacterium RepID=E3ELU3_BIFBS
hypothetical protein
UPF0237 protein BBIF_0434 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_131_000M1_scaffold_261_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4126..5490
DNA (1365bp) protein (455aa)
UPF0210 protein BBIF_0435 n=5 Tax=Bifidobacterium bifidum RepID=E3ELU4_BIFBS
hypothetical protein
UPF0210 protein BBB_0387 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_131_000M1_scaffold_261_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6237..6602
DNA (366bp) protein (122aa)
Putative membrane protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGH1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42491.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_131_000M1_scaffold_261_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6627..7250)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GDE3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI42492.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_131_000M1_scaffold_261_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7822..8469)
DNA (648bp) protein (216aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=7 Tax=Bifidobacterium RepID=E4NZV3_BIFBP
RNA methyltransferase
L3_131_000M1_scaffold_261_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8554..9057
DNA (504bp) protein (168aa)
F5/8 type C domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CDH0_BIFBI
F5/8 type C domain protein {ECO:0000313|EMBL:ERI82063.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ97613.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
coagulation factor 5/8 type domain
L3_131_000M1_scaffold_261_10
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9115..9282
DNA (168bp) protein (56aa)
F5/8 type C domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CDH0_BIFBI
coagulation factor 5/8 type domain
Uncharacterized protein {ECO:0000313|EMBL:CDB22382.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_131_000M1_scaffold_261_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9327..9779
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELU8_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52644.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_131_000M1_scaffold_261_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9862..10827
DNA (966bp) protein (322aa)
A/G-specific adenine glycosylase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HYL1_BIFBI
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EKE51552.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
mutY; A/G-specific DNA glycosylase
L3_131_000M1_scaffold_261_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11006..11578
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGH5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03988.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_131_000M1_scaffold_261_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11727..15410
DNA (3684bp) protein (1228aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
rpoB; DNA-directed RNA polymerase subunit beta RpoB (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DQR7_BIFBI
L3_131_000M1_scaffold_261_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15523..19554
DNA (4032bp) protein (1344aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
DNA-directed RNA polymerase subunit beta' n=5 Tax=Bifidobacterium bifidum RepID=E3ELV2_BIFBS
rpoC; DNA-directed RNA polymerase subunit beta'
L3_131_000M1_scaffold_261_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19809..20354)
DNA (546bp) protein (182aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=E4V840_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF16033.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_131_000M1_scaffold_261_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20369..20962)
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=K2HU02_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE50988.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_131_000M1_scaffold_261_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20984..21877)
DNA (894bp) protein (298aa)
pp2c; protein phosphatase 2C (EC:3.1.3.16)
Pp2c Protein phosphatase 2C n=2 Tax=Bifidobacterium bifidum RepID=E4NZV2_BIFBP
Protein phosphatase 2C {ECO:0000313|EMBL:EKF14842.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_131_000M1_scaffold_261_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21874..24642)
DNA (2769bp) protein (923aa)
Conserved hypothetical membrane spanning protein n=2 Tax=Bifidobacterium bifidum RepID=E4NZW0_BIFBP
hypothetical protein
Conserved hypothetical membrane spanning protein containing transglutaminase domain {ECO:0000313|EMBL:ADO52652.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_131_000M1_scaffold_261_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24639..25958)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HAC8_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50991.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L3_131_000M1_scaffold_261_21
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25969..27675)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GH44_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23750.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L3_131_000M1_scaffold_261_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27740..33718)
DNA (5979bp) protein (1993aa)
fibronectin type III (EC:2.7.11.18)
Protein with a fibronectin type III domain and MoxR protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZW3_BIFBP
Fibronectin type III domain protein {ECO:0000313|EMBL:EFR49788.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_131_000M1_scaffold_261_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33797..35215)
DNA (1419bp) protein (473aa)
Protein kinase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELW0_BIFBS
protein kinase
Protein kinase {ECO:0000313|EMBL:ADO52656.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_131_000M1_scaffold_261_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35457..39740
DNA (4284bp) protein (1428aa)
ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELW1_BIFBS
ATP-dependent DNA helicase, UvrD/REP family {ECO:0000313|EMBL:ADO52657.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
ATP-dependent DNA helicase, UvrD/REP family
L3_131_000M1_scaffold_261_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39737..43942
DNA (4206bp) protein (1402aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
ATP-dependent DNA helicase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZW6_BIFBP
ATP-dependent DNA helicase
L3_131_000M1_scaffold_261_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44078..44944
DNA (867bp) protein (289aa)
GNAT family acetyltransferase n=2 Tax=Bifidobacterium bifidum RepID=K2HX08_BIFBI
GNAT family acetyltransferase
GNAT family acetyltransferase {ECO:0000313|EMBL:EKE50997.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_131_000M1_scaffold_261_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44941..46323
DNA (1383bp) protein (461aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELW4_BIFBS
major facilitator superfamily MFS 1 domain
Uncharacterized protein {ECO:0000313|EMBL:ADO52660.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_131_000M1_scaffold_261_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46712..46960)
DNA (249bp) protein (83aa)
adenine DNA methyltransferase n=1 Tax=Bifidobacterium bifidum RepID=UPI0001976753
Uncharacterized protein {ECO:0000313|EMBL:KFI42511.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
putative DNA modification methyl transferase
L3_131_000M1_scaffold_261_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47133..47312)
DNA (180bp) protein (60aa)
DNA-damage-inducible protein J n=8 Tax=Bifidobacterium RepID=I3WGJ2_BIFBI
hypothetical protein
DNA-damage-inducible protein J {ECO:0000313|EMBL:EKF16209.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_131_000M1_scaffold_261_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47365..47574)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HAD7_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAQ97632.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
transposase
Displaying items 1-30 of 56 in total

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