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L3_131_000M1_scaffold_267

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_267_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1035)
DNA (1035bp) protein (345aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Glucose-6-phosphate isomerase n=2 Tax=Bifidobacterium adolescentis RepID=A0ZZX9_BIFAA
glucose-6-phosphate isomerase
L3_131_000M1_scaffold_267_2
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1359..2366)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZX8_BIFAA
Auxin efflux carrier family transporter {ECO:0000313|EMBL:KFI96410.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_131_000M1_scaffold_267_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2752..3432)
DNA (681bp) protein (227aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H4Q2_9BIFI
Xanthosine triphosphate pyrophosphatase
L3_131_000M1_scaffold_267_4
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3555..4319)
DNA (765bp) protein (255aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Ribonuclease PH n=2 Tax=Bifidobacterium RepID=A7A3R2_BIFAD
ribonuclease PH
L3_131_000M1_scaffold_267_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4525..5847
DNA (1323bp) protein (441aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZX6_BIFAA
L3_131_000M1_scaffold_267_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6034..6351)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GL50_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII75661.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_131_000M1_scaffold_267_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6465..7001
DNA (537bp) protein (179aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Phosphopantetheine adenylyltransferase n=2 Tax=Bifidobacterium RepID=A7A3Q8_BIFAD
pantetheine-phosphate adenylyltransferase
L3_131_000M1_scaffold_267_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6998..7828
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZX4_BIFAA
Cell division protein {ECO:0000313|EMBL:KIM02190.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L3_131_000M1_scaffold_267_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7897..8511
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZX3_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII75658.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_131_000M1_scaffold_267_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8607..8801
DNA (195bp) protein (65aa)
50S ribosomal protein L32 n=3 Tax=Bifidobacterium RepID=RL32_BIFAA
50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_131_000M1_scaffold_267_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9046..9942
DNA (897bp) protein (299aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Ribonuclease 3 n=3 Tax=Bifidobacterium RepID=A0ZZX0_BIFAA
ribonuclease III
L3_131_000M1_scaffold_267_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10244..12106
DNA (1863bp) protein (621aa)
Acetolactate synthase 1 catalytic subunit {ECO:0000313|EMBL:KIM02187.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KIM02187.1};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3Q2_BIFAD
acetolactate synthase 1 catalytic subunit
L3_131_000M1_scaffold_267_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12139..12693
DNA (555bp) protein (185aa)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EDN83534.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EDN83534.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Acetolactate synthase small subunit n=2 Tax=Bifidobacterium adolescentis RepID=A0ZZW8_BIFAA
acetolactate synthase 3 regulatory subunit
L3_131_000M1_scaffold_267_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12770..14029)
DNA (1260bp) protein (420aa)
Transporter major facilitator family protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0L5_9BIFI
Major facilitator transporter {ECO:0000313|EMBL:KIM02185.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L3_131_000M1_scaffold_267_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14119..14760)
DNA (642bp) protein (214aa)
Transcriptional regulator, ArsR family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3P9_BIFAD
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EDN83532.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
transcription regulator ArsR
L3_131_000M1_scaffold_267_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14897..15526
DNA (630bp) protein (210aa)
Transcriptional regulator, LuxR family n=2 Tax=Bifidobacterium RepID=A7A3P8_BIFAD
response regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIM02184.1}; Response regulator {ECO:0000313|EMBL:AII75651.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_131_000M1_scaffold_267_17
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15529..16656
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0L1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY18351.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L3_131_000M1_scaffold_267_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16672..17046)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZW3_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII75649.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_131_000M1_scaffold_267_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17313..17501
DNA (189bp) protein (63aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3P2_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05211.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_131_000M1_scaffold_267_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17599..19797)
DNA (2199bp) protein (733aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3P1_BIFAD
ATP binding protein of ABC transporter {ECO:0000313|EMBL:AJE05210.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
ATP binding protein of ABC transporter
L3_131_000M1_scaffold_267_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20109..20837)
DNA (729bp) protein (243aa)
Possible amidotransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZW1_BIFAA
amidotransferase
Possible amidotransferase {ECO:0000313|EMBL:BAF38994.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_131_000M1_scaffold_267_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20865..22604
DNA (1740bp) protein (580aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Cysteine--tRNA ligase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3N7_BIFAD
cysteinyl-tRNA synthetase
L3_131_000M1_scaffold_267_23
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


22660..24309
DNA (1650bp) protein (550aa)
Signal recognition particle protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZV9_BIFAA
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
ffh; signal recognition particle protein
L3_131_000M1_scaffold_267_24
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24453..25550)
DNA (1098bp) protein (366aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3N5_BIFAD
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:KFI96389.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_131_000M1_scaffold_267_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


25854..26303
DNA (450bp) protein (150aa)
30S ribosomal protein S16 n=3 Tax=Bifidobacterium RepID=RS16_BIFAA
30S ribosomal protein S16P
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_131_000M1_scaffold_267_26
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26306..26539
DNA (234bp) protein (78aa)
UPF0109 protein BAD_0208 n=3 Tax=Bifidobacterium RepID=A0ZZV6_BIFAA
hypothetical protein
UPF0109 protein BRUM_0602 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
L3_131_000M1_scaffold_267_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26561..27148
DNA (588bp) protein (196aa)
Ribosome maturation factor RimM n=2 Tax=Bifidobacterium adolescentis RepID=RIMM_BIFAA
putative 16S rRNA-processing protein rimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_131_000M1_scaffold_267_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27181..28143
DNA (963bp) protein (321aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014918}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014917};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3N1_BIFAD
tRNA (guanine-N(1)-)-methyltransferase
L3_131_000M1_scaffold_267_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28218..28841)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GNW0_9BIFI
putative rRNA (guanine-N(2)-)-methyltransferase
Putative rRNA (Guanine-N(2)-)-methyltransferase {ECO:0000313|EMBL:AII75639.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_131_000M1_scaffold_267_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28853..31516)
DNA (2664bp) protein (888aa)
Putative ATP-dependent DNA helicase RecG n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3M9_BIFAD
ATP-dependent DNA helicase {ECO:0000313|EMBL:KIM02174.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
ATP-dependent DNA helicase
Displaying items 1-30 of 75 in total

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