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L3_131_000M1_scaffold_292

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_292_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..301
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7G809_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02115.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_131_000M1_scaffold_292_2
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

599..1078
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BQ01_9FIRM
Protein of unknown function (DUF3036).
Uncharacterized protein {ECO:0000313|EMBL:CDA55352.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_131_000M1_scaffold_292_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1089..1307
DNA (219bp) protein (73aa)
Predicted transcriptional regulator n=3 Tax=Roseburia intestinalis RepID=D4KRS8_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL11773.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_292_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1282..2880
DNA (1599bp) protein (533aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7G805_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11774.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_292_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2992..3306
DNA (315bp) protein (105aa)
Nucleoside-binding protein n=3 Tax=Roseburia intestinalis RepID=D4KWN5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09578.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_292_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3322..4203
DNA (882bp) protein (294aa)
Nucleoside-binding protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B8F5_9FIRM
Nucleoside-binding protein {ECO:0000313|EMBL:CDA55346.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
nucleoside-binding protein
L3_131_000M1_scaffold_292_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4216..5925
DNA (1710bp) protein (570aa)
Methyl-accepting chemotaxis protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KRS5_9FIRM
Methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CBL09577.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_292_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5967..6476
DNA (510bp) protein (170aa)
ADP-ribose pyrophosphatase n=4 Tax=Roseburia RepID=D4KRS4_9FIRM
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CDA55344.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_131_000M1_scaffold_292_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6654..7124
DNA (471bp) protein (157aa)
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Methylglyoxal synthase n=4 Tax=Roseburia RepID=D4KWN8_9FIRM
L3_131_000M1_scaffold_292_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7140..8015
DNA (876bp) protein (292aa)
EDD domain protein, DegV family n=3 Tax=Roseburia RepID=D4KRS2_9FIRM
EDD domain protein, DegV family
EDD domain protein DegV family {ECO:0000313|EMBL:CDA55341.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_131_000M1_scaffold_292_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8156..9505)
DNA (1350bp) protein (450aa)
Putative efflux protein, MATE family n=2 Tax=Roseburia intestinalis RepID=D4KRS1_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL09573.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_292_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9682..10563
DNA (882bp) protein (294aa)
Transcriptional regulator n=3 Tax=Roseburia RepID=D4KRS0_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL11781.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_292_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10682..11962
DNA (1281bp) protein (427aa)
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Adenylosuccinate synthetase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KRR9_9FIRM
L3_131_000M1_scaffold_292_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11981..12583
DNA (603bp) protein (201aa)
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KRR8_9FIRM
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CBL09570.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_292_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12892..13839
DNA (948bp) protein (316aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7Z3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEV02099.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
multidrug ABC transporter ATPase
L3_131_000M1_scaffold_292_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13839..15959
DNA (2121bp) protein (707aa)
ABC-type transport system involved in multi-copper enzyme maturation, permease component n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KRR7_9FIRM
ABC-type transport system involved in multi-copper enzyme maturation, permease component
ABC-type transport system involved in multi-copper enzyme maturation, permease component {ECO:0000313|EMBL:CBL09569.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_292_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15959..16609
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KRR6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09568.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_292_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16732..17265
DNA (534bp) protein (178aa)
Transcriptional regulator MarR family n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B8E1_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEV02095.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Transcriptional regulators
L3_131_000M1_scaffold_292_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17262..18617
DNA (1356bp) protein (452aa)
Citrate synthase (EC:2.3.3.5 2.3.3.1)
Citrate synthase n=3 Tax=Roseburia intestinalis RepID=D4KRR3_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000313|EMBL:CBL11788.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_292_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18637..18852)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B2T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55329.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_131_000M1_scaffold_292_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19341..19802
DNA (462bp) protein (154aa)
Predicted membrane protein n=2 Tax=Roseburia intestinalis RepID=D4KMD5_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL08037.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_292_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19873..20850
DNA (978bp) protein (326aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KMD6_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL08038.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_292_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20859..21803
DNA (945bp) protein (315aa)
Glycosyltransferases involved in cell wall biogenesis n=4 Tax=Roseburia RepID=D4KMD7_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL12603.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_292_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21830..23938
DNA (2109bp) protein (703aa)
Listeria/Bacterioides repeat n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KMD8_9FIRM
Listeria/Bacterioides repeat
Listeria/Bacterioides repeat {ECO:0000313|EMBL:CBL08040.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_292_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24074..25174
DNA (1101bp) protein (367aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G7A7_9FIRM
Protein of unknown function (DUF3048).
Uncharacterized protein {ECO:0000313|EMBL:CBL12605.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_292_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25330..26049
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KME0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08042.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_292_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26053..27186
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KME1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08043.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_292_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27176..28213
DNA (1038bp) protein (346aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZ18_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12608.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_292_29
unknown

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28554..28784
DNA (231bp) protein (77aa)

This feature has no annotations

L3_131_000M1_scaffold_292_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28900..29283
DNA (384bp) protein (128aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZ19_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDA54132.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Displaying items 1-30 of 93 in total

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