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L3_131_000M1_scaffold_359

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_359_1
unknown

Not on your lists

2..91
DNA (90bp) protein (30aa)

This feature has no annotations

L3_131_000M1_scaffold_359_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

836..1309
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79172.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_131_000M1_scaffold_359_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1435..3879)
DNA (2445bp) protein (815aa)
Cellobiose phosphorylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULI9_9FIRM
Cellobiose phosphorylase {ECO:0000313|EMBL:CCZ79173.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycosyl transferase family protein
L3_131_000M1_scaffold_359_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4359..5381
DNA (1023bp) protein (341aa)
Transcriptional regulator (LacI family) protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTY9_9FIRM
Transcriptional regulator (LacI family) protein {ECO:0000313|EMBL:CCZ79174.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator (LacI family) protein
L3_131_000M1_scaffold_359_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5443..6852
DNA (1410bp) protein (470aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM89_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCZ79175.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_131_000M1_scaffold_359_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7007..7924
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79176.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_131_000M1_scaffold_359_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7930..8796
DNA (867bp) protein (289aa)
Sugar ABC transporter permease n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEL6_9FIRM
Sugar ABC transporter permease {ECO:0000313|EMBL:CCZ79177.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_131_000M1_scaffold_359_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8909..10756)
DNA (1848bp) protein (616aa)
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULJ3_9FIRM
Asparagine synthetase {ECO:0000313|EMBL:CCZ79178.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_131_000M1_scaffold_359_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10889..11425
DNA (537bp) protein (179aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTZ4_9FIRM
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:CCZ79179.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Bi-functional aminoacyl-tRNA synthetase
L3_131_000M1_scaffold_359_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11412..11891)
DNA (480bp) protein (160aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Cytosine/adenosine deaminases n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM93_9FIRM
Cytosine/adenosine deaminases
L3_131_000M1_scaffold_359_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11992..12540
DNA (549bp) protein (183aa)
Acetyltransferases, including N-acetylases of ribosomal proteins (EC:2.3.1.128)
Acetyltransferases including N-acetylases of ribosomal proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6U2_9FIRM
Acetyltransferases including N-acetylases of ribosomal proteins {ECO:0000313|EMBL:CCZ79181.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_131_000M1_scaffold_359_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12527..13459)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79182.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_131_000M1_scaffold_359_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13634..14023
DNA (390bp) protein (130aa)
Fe2+/Zn2+ uptake regulation proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULJ9_9FIRM
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CCZ79183.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Fe2+/Zn2+ uptake regulation proteins
L3_131_000M1_scaffold_359_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14053..14595
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79184.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ferredoxin hydrogenase
L3_131_000M1_scaffold_359_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14795..15526
DNA (732bp) protein (244aa)
Bacterial group 2 Ig-like protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM97_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:CCZ79185.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_131_000M1_scaffold_359_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15716..17749
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79186.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_131_000M1_scaffold_359_17
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17947..20112
DNA (2166bp) protein (722aa)
Alpha-galactosidase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6KZD7_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CDB78855.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
glycoside hydrolase clan GH-D
L3_131_000M1_scaffold_359_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20185..21144
DNA (960bp) protein (320aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.2)
Glucokinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU05_9FIRM
Glucokinase {ECO:0000313|EMBL:CCZ79189.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_131_000M1_scaffold_359_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21161..21565
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79190.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_131_000M1_scaffold_359_20
unknown

Not on your lists

21747..21908
DNA (162bp) protein (54aa)

This feature has no annotations

L3_131_000M1_scaffold_359_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22247..22519
DNA (273bp) protein (91aa)
Anti-sigma-28 factor FlgM n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6V2_9FIRM
Anti-sigma-28 factor FlgM {ECO:0000313|EMBL:CCZ79191.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Anti-sigma-28 factor, FlgM.
L3_131_000M1_scaffold_359_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22550..23062
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79192.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_131_000M1_scaffold_359_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23077..24786
DNA (1710bp) protein (570aa)
Flagellar hook-associated protein FlgK n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULK8_9FIRM
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:CCZ79193.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar hook-associated protein FlgK
L3_131_000M1_scaffold_359_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24805..26676
DNA (1872bp) protein (624aa)
Flagellar hook-associated protein FlgK n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU10_9FIRM
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:CCZ79194.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar hook-associated protein FlgK
L3_131_000M1_scaffold_359_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26732..28324
DNA (1593bp) protein (531aa)
Flagellar hook-associated protein 3 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMA4_9FIRM
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:CCZ79195.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar hook-associated protein 3
L3_131_000M1_scaffold_359_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28350..28814
DNA (465bp) protein (155aa)
Flagellar assembly factor FliW n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6V7_9FIRM
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar assembly factor fliW
L3_131_000M1_scaffold_359_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28818..29036
DNA (219bp) protein (73aa)
Carbon storage regulator homolog n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEN2_9FIRM
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbon storage regulator (csrA)
L3_131_000M1_scaffold_359_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29169..29582
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79198.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized flagellar protein FlaG
L3_131_000M1_scaffold_359_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29601..31154
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79199.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
fliD1; flagellar hook-associated protein FliD1
L3_131_000M1_scaffold_359_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31219..31626
DNA (408bp) protein (136aa)
Flagellar protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMA7_9FIRM
Flagellar protein {ECO:0000313|EMBL:CCZ79200.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar protein
Displaying items 1-30 of 73 in total

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