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L3_131_000M1_scaffold_365

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_365_1
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(423..1415)
DNA (993bp) protein (331aa)
Fructose-1,6-bisphosphate aldolase, class II n=3 Tax=Alistipes RepID=I3YKK8_ALIFI
fructose-1,6-bisphosphate aldolase
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CCZ75556.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_131_000M1_scaffold_365_2
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1710..3323
DNA (1614bp) protein (538aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily {ECO:0000313|EMBL:AFL77525.1}; EC=4.2.1.2 {ECO:0000313|EMBL:AFL77525.1};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKK7_ALIFI
L3_131_000M1_scaffold_365_3
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3400..5256
DNA (1857bp) protein (619aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YKK6_ALIFI
Uncharacterized protein {ECO:0000313|EMBL:AFL77524.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
hypothetical protein
L3_131_000M1_scaffold_365_4
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5265..6083
DNA (819bp) protein (273aa)
DNA uptake lipoprotein n=2 Tax=Alistipes RepID=I3YKK5_ALIFI
DNA uptake lipoprotein
DNA uptake lipoprotein {ECO:0000313|EMBL:AFL77523.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_365_5
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6084..6680
DNA (597bp) protein (199aa)
Recombination protein RecR n=2 Tax=Alistipes RepID=I3YKK4_ALIFI
DNA replication and repair protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_131_000M1_scaffold_365_6
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6727..7824
DNA (1098bp) protein (366aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YKK3_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77521.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_365_7
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7868..8866
DNA (999bp) protein (333aa)
Malate/lactate dehydrogenase n=3 Tax=Alistipes RepID=I3YKK2_ALIFI
malate/lactate dehydrogenase
Malate/lactate dehydrogenase {ECO:0000313|EMBL:CCZ77276.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_131_000M1_scaffold_365_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8949..9377)
DNA (429bp) protein (143aa)
Heat shock protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKK1_ALIFI
heat shock protein
Heat shock protein {ECO:0000313|EMBL:AFL77519.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_365_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9455..9829
DNA (375bp) protein (125aa)
Putative endoribonuclease L-PSP n=2 Tax=Alistipes RepID=E4M937_9BACT
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:CCZ77278.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
endoribonuclease L-PSP
L3_131_000M1_scaffold_365_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9769..9921)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKJ9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77517.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_365_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10058..12613
DNA (2556bp) protein (852aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EFR58557.1}; EC=1.17.4.1 {ECO:0000313|EMBL:EFR58557.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
ribonucleoside-diphosphate reductase class II (EC:1.17.4.-)
Ribonucleoside-diphosphate reductase n=3 Tax=Alistipes RepID=I3YKJ8_ALIFI
L3_131_000M1_scaffold_365_12
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12762..13970
DNA (1209bp) protein (403aa)
Outer membrane protein/peptidoglycan-associated (Lipo)protein n=3 Tax=Alistipes RepID=I3YKJ7_ALIFI
Outer membrane protein 40 {ECO:0000313|EMBL:EFR58549.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
outer membrane protein/peptidoglycan-associated (lipo)protein
L3_131_000M1_scaffold_365_13
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14344..14634)
DNA (291bp) protein (97aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YKJ6_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77514.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_365_14
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14631..15977)
DNA (1347bp) protein (449aa)
DNA replication and repair protein RecF n=1 Tax=Alistipes sp. HGB5 RepID=E4M933_9BACT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
DNA replication and repair protein RecF
L3_131_000M1_scaffold_365_15
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16169..16852
DNA (684bp) protein (228aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YKJ4_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ77283.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_131_000M1_scaffold_365_16
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16861..17391
DNA (531bp) protein (177aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
6,7-dimethyl-8-ribityllumazine synthase n=3 Tax=Alistipes RepID=I3YKJ3_ALIFI
L3_131_000M1_scaffold_365_17
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17742..19166)
DNA (1425bp) protein (475aa)
Putative phosphohydrolase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UGX7_9BACT
Putative phosphohydrolase {ECO:0000313|EMBL:CCZ77285.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
phosphohydrolase
L3_131_000M1_scaffold_365_18
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19218..20567)
DNA (1350bp) protein (450aa)
Transporter n=3 Tax=Alistipes RepID=I3YKJ1_ALIFI
SNF family Na+-dependent transporter
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_131_000M1_scaffold_365_19
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20620..20973)
DNA (354bp) protein (118aa)
Dihydroneopterin aldolase n=2 Tax=Alistipes RepID=I3YKJ0_ALIFI
dihydroneopterin aldolase
Dihydroneopterin aldolase {ECO:0000313|EMBL:AFL77508.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_365_20
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20975..22273)
DNA (1299bp) protein (433aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Tyrosine--tRNA ligase n=3 Tax=Alistipes RepID=I3YKI9_ALIFI
L3_131_000M1_scaffold_365_21
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22405..24675)
DNA (2271bp) protein (757aa)
DNA polymerase III subunit gamma and tau n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UNG9_9BACT
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CCZ77289.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
DNA polymerase III subunits gamma and tau
L3_131_000M1_scaffold_365_22
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25015..27612
DNA (2598bp) protein (866aa)
ATP-dependent chaperone protein ClpB n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UGY1_9BACT
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
ATP-dependent chaperone ClpB
L3_131_000M1_scaffold_365_23
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27755..28651)
DNA (897bp) protein (299aa)
Poly(3-hydroxybutyrate) depolymerase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKI6_ALIFI
poly(3-hydroxybutyrate) depolymerase
Poly(3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:AFL77504.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_365_24
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28669..29598)
DNA (930bp) protein (310aa)
Glycosyl transferase n=3 Tax=Alistipes RepID=I3YKI5_ALIFI
glycosyl transferase family protein
Glycosyl transferase {ECO:0000313|EMBL:CCZ77292.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_131_000M1_scaffold_365_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29785..30669
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M919_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR58552.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_131_000M1_scaffold_365_26
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30752..31405)
DNA (654bp) protein (218aa)
CMP-N-acetylneuraminic acid synthetase n=3 Tax=Alistipes RepID=I3YKI3_ALIFI
CMP-N-acetylneuraminic acid synthetase
CMP-N-acetylneuraminic acid synthetase {ECO:0000313|EMBL:CCZ77294.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_131_000M1_scaffold_365_27
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31459..32424)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M917_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR58589.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Acyl-protein synthetase, LuxE
L3_131_000M1_scaffold_365_28
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32779..33252)
DNA (474bp) protein (158aa)
Translation initiation factor IF-3 n=3 Tax=Alistipes RepID=I3YKI1_ALIFI
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000313|EMBL:CCZ77296.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_131_000M1_scaffold_365_29
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33541..35493)
DNA (1953bp) protein (651aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=2 Tax=Alistipes RepID=E4M915_9BACT
L3_131_000M1_scaffold_365_30
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35722..36816)
DNA (1095bp) protein (365aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=3 Tax=Alistipes RepID=I3YKH9_ALIFI
Displaying items 1-30 of 62 in total

View Taxonomy