name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_131_000M1_scaffold_371_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
96..923
|
gpmA; 2,3-bisphosphoglycerate-dependentphosphoglycerate mutase (EC:5.4.2.1)
2, 3-bisphosphoglycerate-dependentphosphoglycerate mutase n=4 Tax=Bifidobacterium bifidum RepID=I3WHN2_BIFBI
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:ERI82364.1}; Flags: Fragment;; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
|
|
L3_131_000M1_scaffold_371_2
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
1044..1454
|
Secreted protein n=8 Tax=Bifidobacterium RepID=I3WHN3_BIFBI
hypothetical protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:CDB23284.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L3_131_000M1_scaffold_371_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
1454..1693
|
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=I3WHN4_BIFBI
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:KFI42864.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
|
|
L3_131_000M1_scaffold_371_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
1762..4485
|
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P1B4_BIFBP
|
|
L3_131_000M1_scaffold_371_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
4494..4952
|
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Putative Holliday junction resolvase n=4 Tax=Bifidobacterium bifidum RepID=E4P1B5_BIFBP
endonuclease involved in recombination
|
|
L3_131_000M1_scaffold_371_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
4964..6151
|
Aminodeoxychorismate lyase n=3 Tax=Bifidobacterium bifidum RepID=E3EM32_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF14947.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
|
|
L3_131_000M1_scaffold_371_7
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(6148..6618)
|
Conserved hypothetical membrane spanning protein n=2 Tax=Bifidobacterium RepID=E3EM33_BIFBS
hypothetical protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:CDB23289.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L3_131_000M1_scaffold_371_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
6665..7858
|
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Chorismate synthase n=5 Tax=Bifidobacterium bifidum RepID=E3EM34_BIFBS
aroC; chorismate synthase
|
|
L3_131_000M1_scaffold_371_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
7916..9538
|
Shikimate kinase/3-dehydroquinate synthase n=3 Tax=Bifidobacterium bifidum RepID=E3EM35_BIFBS
aroB; shikimate kinase
Shikimate kinase/3-dehydroquinate synthase {ECO:0000313|EMBL:ADO53042.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_131_000M1_scaffold_371_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
9628..10071
|
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
3-dehydroquinate dehydratase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHP1_BIFBI
|
|
L3_131_000M1_scaffold_371_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
10155..10409
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHP2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04405.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L3_131_000M1_scaffold_371_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(10484..11323)
|
LuxR family transcriptional regulator n=1 Tax=Bifidobacterium bifidum RepID=UPI00036CDD2A
Response regulator receiver domain protein {ECO:0000313|EMBL:ERI82353.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
luxR; regulatory protein
|
|
L3_131_000M1_scaffold_371_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(11398..12126)
|
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V9B3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50205.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
sortase
|
|
L3_131_000M1_scaffold_371_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
12171..13838
|
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
CTP synthase n=7 Tax=Bifidobacterium RepID=E3EM40_BIFBS
pyrG; CTP synthase
|
|
L3_131_000M1_scaffold_371_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
14060..15559
|
FeS assembly protein SufB n=7 Tax=Bifidobacterium RepID=E3EM41_BIFBS
sufB; FeS assembly protein SufB
FeS assembly protein {ECO:0000313|EMBL:AFL04409.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L3_131_000M1_scaffold_371_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
15565..16794
|
FeS assembly protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I6V0_BIFBI
FeS assembly protein {ECO:0000313|EMBL:EKE50604.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
sufD; FeS assembly protein
|
|
L3_131_000M1_scaffold_371_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
16797..17585
|
FeS assembly ATPase SufC n=6 Tax=Bifidobacterium RepID=E3EM43_BIFBS
sufC; FeS assembly ATPase SufC
FeS assembly ATPase {ECO:0000313|EMBL:AFL04411.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L3_131_000M1_scaffold_371_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
17807..19078
|
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Cysteine desulfurase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EM44_BIFBS
iscS; cysteine desulfurase/Selenocysteine lyase
|
|
L3_131_000M1_scaffold_371_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
19234..19782
|
IscU protein n=2 Tax=Bifidobacterium bifidum RepID=E4P1C9_BIFBP
iscU; IscU protein
NifU family SUF system FeS assembly protein {ECO:0000313|EMBL:EKE50601.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
|
|
L3_131_000M1_scaffold_371_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
19861..20445
|
Putative metal-sulfur cluster biosyntheticenzyme n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHQ1_BIFBI
paaD; putative metal-sulfur cluster biosyntheticenzyme
Putative metal-sulfur cluster biosyntheticenzyme {ECO:0000313|EMBL:AFL04414.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L3_131_000M1_scaffold_371_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(20551..21798)
|
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Glucose-1-phosphate adenylyltransferase n=8 Tax=Bifidobacterium RepID=E3EM47_BIFBS
|
|
L3_131_000M1_scaffold_371_22
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(21964..22842)
|
SpoU rRNA methylase family protein n=7 Tax=Bifidobacterium RepID=E4P1D2_BIFBP
tnsR; putative tRNA/rRNA methyl transferase
SpoU rRNA methylase family protein {ECO:0000313|EMBL:CDB23304.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L3_131_000M1_scaffold_371_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
23153..23950
|
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HVW0_BIFBI
RNA methyltransferase
|
|
L3_131_000M1_scaffold_371_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24024..24362
|
HIT family protein n=6 Tax=Bifidobacterium RepID=E4P1D4_BIFBP
putative HIT family hydrolase
HIT family protein {ECO:0000313|EMBL:KFI42884.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
|
|
L3_131_000M1_scaffold_371_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24371..25456
|
PhoH PhoH protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P1D5_BIFBP
phoH; PhoH protein
Phosphate starvation-induced protein {ECO:0000313|EMBL:AFL04419.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L3_131_000M1_scaffold_371_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
25453..25998
|
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Endoribonuclease YbeY n=8 Tax=Bifidobacterium RepID=E3EM52_BIFBS
putative metalloprotease
|
|
L3_131_000M1_scaffold_371_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
26076..27494
|
Hemolysin-like protein n=4 Tax=Bifidobacterium bifidum RepID=I3WHQ8_BIFBI
hypothetical protein
Membrane spanning protein {ECO:0000313|EMBL:KFI42887.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
|
|
L3_131_000M1_scaffold_371_28
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
27543..28553
|
GTPase Era n=6 Tax=Bifidobacterium RepID=I3WHQ9_BIFBI
era; GTP-binding protein
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L3_131_000M1_scaffold_371_29
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(28654..30690)
|
Long-chain-fatty-acid--CoA ligase n=2 Tax=Bifidobacterium RepID=R6GPX1_9BIFI
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CDB23311.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
fadD3; long-chain-fatty-acid--CoA ligase
|
|
L3_131_000M1_scaffold_371_30
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
30910..32049
|
pntAA; NAD(P) transhydrogenase subunit alpha part 1 (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha subunit n=8 Tax=Bifidobacterium RepID=E3EM56_BIFBS
PntA1 NAD(P) transhydrogenase subunit alpha part 1 {ECO:0000313|EMBL:CDB23312.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|