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L3_131_000M1_scaffold_451

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_451_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(218..1762)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75346.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
L3_131_000M1_scaffold_451_2

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2279..2968
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1TUH0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC71334.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
PAP2 superfamily.
L3_131_000M1_scaffold_451_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3442..4644
DNA (1203bp) protein (401aa)
Flavodoxin/nitric oxide synthase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY42_ROSHA
flavodoxin/nitric oxide synthase
Flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:AEN97630.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_131_000M1_scaffold_451_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4767..5999)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76291.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
L3_131_000M1_scaffold_451_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5996..7552)
DNA (1557bp) protein (519aa)
GDSL-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM27_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EFB76292.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_131_000M1_scaffold_451_6
unknown

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comp(7728..8828)
DNA (1101bp) protein (367aa)

This feature has no annotations

L3_131_000M1_scaffold_451_7
unknown

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comp(8825..9151)
DNA (327bp) protein (109aa)

This feature has no annotations

L3_131_000M1_scaffold_451_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9997..11676)
DNA (1680bp) protein (560aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69123.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Resolvase domain
L3_131_000M1_scaffold_451_9
unknown

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comp(11868..12047)
DNA (180bp) protein (60aa)

This feature has no annotations

L3_131_000M1_scaffold_451_10

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comp(12035..12535)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RQE8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC47578.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_131_000M1_scaffold_451_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12528..12935)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76836.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_131_000M1_scaffold_451_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13016..14944)
DNA (1929bp) protein (643aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RU59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL69116.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Rad3-related DNA helicases
L3_131_000M1_scaffold_451_13
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15369..15695)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AYC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81456.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_131_000M1_scaffold_451_14
unknown

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comp(16064..16231)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_131_000M1_scaffold_451_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16245..16814)
DNA (570bp) protein (190aa)
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KB98_9FIRM
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide {ECO:0000313|EMBL:CBL02111.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_131_000M1_scaffold_451_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16875..18227)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77368.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_131_000M1_scaffold_451_17

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comp(18224..18946)
DNA (723bp) protein (241aa)
Response regulator of the LytR/AlgR family (Fragment) n=1 Tax=human gut metagenome RepID=K1SW10_9ZZZZ
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:EKC58035.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Response regulator of the LytR/AlgR family
L3_131_000M1_scaffold_451_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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19145..19507
DNA (363bp) protein (121aa)
Transcriptional regulator XRE family n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GRT1_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CDB27135.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L3_131_000M1_scaffold_451_19
unknown

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19778..20260
DNA (483bp) protein (161aa)

This feature has no annotations

L3_131_000M1_scaffold_451_20

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20393..21106
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RQQ8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC47713.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_131_000M1_scaffold_451_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21103..21999
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Amphibacillus jilinensis RepID=UPI00036A2302
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76931.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_131_000M1_scaffold_451_22
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21992..22828
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=root RepID=R5N046_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90966.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_131_000M1_scaffold_451_23
Cryptobacterium sp. CAG:338, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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22843..23475
DNA (633bp) protein (211aa)
ABC transporter related protein n=1 Tax=Cryptobacterium sp. CAG:338 RepID=R7CCI3_9ACTN
ABC transporter related protein {ECO:0000313|EMBL:CDD75914.1}; TaxID=1262868 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium; environmental samples.;" source="Cryptobacterium sp. CAG:338.;"
ABC transporter-like protein
L3_131_000M1_scaffold_451_24
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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23490..24134
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9K5_ATOPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV50793.1}; Flags: Precursor;; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
L3_131_000M1_scaffold_451_25
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24416..25747)
DNA (1332bp) protein (444aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EM00_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_131_000M1_scaffold_451_26
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25731..26414)
DNA (684bp) protein (228aa)
Putative response regulator MprA n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B7M4_9CLOT
Putative response regulator MprA {ECO:0000313|EMBL:ERI67793.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_131_000M1_scaffold_451_27

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26511..28742
DNA (2232bp) protein (744aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SDM2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC55583.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ABC-type sugar transport system, periplasmic component
L3_131_000M1_scaffold_451_28
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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28726..29628
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RX55_9FIRM
Sugar ABC transporter permease {ECO:0000313|EMBL:KJF40866.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_131_000M1_scaffold_451_29

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29621..30484
DNA (864bp) protein (288aa)
Sugar ABC transporter permease (Fragment) n=1 Tax=human gut metagenome RepID=K1SGV0_9ZZZZ
Sugar ABC transporter permease {ECO:0000313|EMBL:EKC52960.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_131_000M1_scaffold_451_30

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30481..31968
DNA (1488bp) protein (496aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TR48_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC61846.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
RND family transporter
Displaying items 1-30 of 86 in total

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