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L3_131_000M1_scaffold_488

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_488_1
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(96..359)
DNA (264bp) protein (88aa)
Phosphocarrier, HPr family n=2 Tax=Eubacterium RepID=C0EZ96_9FIRM
Phosphocarrier HPr family {ECO:0000313|EMBL:CDB17902.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Phosphotransferase System HPr (HPr) Family
L3_131_000M1_scaffold_488_2
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(560..811)
DNA (252bp) protein (84aa)
Smr domain protein n=2 Tax=Eubacterium RepID=C0EZ97_9FIRM
Smr domain protein {ECO:0000313|EMBL:CDB17903.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Smr protein/MutS2
L3_131_000M1_scaffold_488_3
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(820..1200)
DNA (381bp) protein (127aa)
Putative endoribonuclease L-PSP n=2 Tax=Eubacterium RepID=C0EZ98_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EEG35404.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
endoribonuclease L-PSP
L3_131_000M1_scaffold_488_4
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1366..2073)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G0R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17905.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L3_131_000M1_scaffold_488_5
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2070..2981)
DNA (912bp) protein (304aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Endonuclease IV (EC:3.1.21.2 3.1.21.-)
Probable endonuclease 4 n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZA0_9FIRM
L3_131_000M1_scaffold_488_6
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3892..4311)
DNA (420bp) protein (140aa)
Cupin domain protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G322_9FIRM
Cupin domain protein {ECO:0000313|EMBL:CDB18725.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Nudix hydrolase
L3_131_000M1_scaffold_488_7
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4477..4941)
DNA (465bp) protein (155aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=2 Tax=Eubacterium RepID=C0EZS4_9FIRM
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:CDB18724.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L3_131_000M1_scaffold_488_8
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5038..6591)
DNA (1554bp) protein (518aa)
Putative ribulokinase n=2 Tax=Eubacterium RepID=C0EZS5_9FIRM
Putative ribulokinase {ECO:0000313|EMBL:CDB18723.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
putative sugar kinase
L3_131_000M1_scaffold_488_9
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6694..7131)
DNA (438bp) protein (146aa)
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=2 Tax=Eubacterium RepID=C0EZS6_9FIRM
Sugar-phosphate isomerase RpiB/LacA/LacB family {ECO:0000313|EMBL:CDB18722.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
sugar phosphate isomerase
L3_131_000M1_scaffold_488_10
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7222..8016)
DNA (795bp) protein (265aa)
HAD hydrolase, family IIA n=2 Tax=Eubacterium RepID=C0EZS7_9FIRM
HAD hydrolase family IIA {ECO:0000313|EMBL:CDB18721.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L3_131_000M1_scaffold_488_11
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8213..9391)
DNA (1179bp) protein (393aa)
3-dehydroquinate synthase n=2 Tax=Eubacterium RepID=C0F086_9FIRM
3-dehydroquinate synthase {ECO:0000313|EMBL:EEG35064.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L3_131_000M1_scaffold_488_12
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9483..10430)
DNA (948bp) protein (316aa)
Putative sugar-binding domain protein n=2 Tax=Eubacterium RepID=C0F087_9FIRM
Putative sugar-binding domain protein {ECO:0000313|EMBL:CDB18719.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L3_131_000M1_scaffold_488_13
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10856..11107)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FZN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18718.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L3_131_000M1_scaffold_488_14
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12065..13663
DNA (1599bp) protein (533aa)
dltA1; D-alanine--poly(phosphoribitol) ligase subunit 1 (EC:6.1.1.13)
AMP-binding enzyme n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXA2_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:EEG36104.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L3_131_000M1_scaffold_488_15
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13750..13980
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EXA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18737.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L3_131_000M1_scaffold_488_16
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13989..15581
DNA (1593bp) protein (531aa)
MBOAT family protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXA0_9FIRM
MBOAT family protein {ECO:0000313|EMBL:EEG36102.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Predicted membrane protein involved in D-alanine export
L3_131_000M1_scaffold_488_17
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15600..16571
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EX99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG36101.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L3_131_000M1_scaffold_488_18
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16818..17357
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G339_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18740.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L3_131_000M1_scaffold_488_19
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18021..19517)
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GBS6_9FIRM
L3_131_000M1_scaffold_488_20
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20295..21068)
DNA (774bp) protein (258aa)
RNA methyltransferase TrmH family n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FVX3_9FIRM
RNA methyltransferase TrmH family {ECO:0000313|EMBL:CDB17358.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
rRNA methylases
L3_131_000M1_scaffold_488_21
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21199..21726)
DNA (528bp) protein (176aa)
Transcriptional regulator, TetR family n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EUZ2_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEG36919.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
TetR family transcriptional regulator
L3_131_000M1_scaffold_488_22
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21834..23063)
DNA (1230bp) protein (410aa)
YbbR-like protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EUZ1_9FIRM
YbbR-like protein {ECO:0000313|EMBL:EEG36918.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L3_131_000M1_scaffold_488_23
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23044..23946)
DNA (903bp) protein (301aa)
TIGR00159 family protein n=2 Tax=Eubacterium RepID=C0EUZ0_9FIRM
TIGR00159 family protein {ECO:0000313|EMBL:CDB17412.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L3_131_000M1_scaffold_488_24
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23966..24979)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FW34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17413.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L3_131_000M1_scaffold_488_25
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24984..25388)
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EUY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17414.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L3_131_000M1_scaffold_488_26
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25648..26130)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=2 Tax=Eubacterium RepID=C0EUY7_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
transcription elongation factor GreA
L3_131_000M1_scaffold_488_27
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26193..27143)
DNA (951bp) protein (317aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
tRNA-dihydrouridine synthase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G7V3_9FIRM
tRNA-U20-dihydrouridine synthase
L3_131_000M1_scaffold_488_28
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27147..27920)
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Type III pantothenate kinase n=2 Tax=Eubacterium RepID=C0EUY5_9FIRM
pantothenate kinase
L3_131_000M1_scaffold_488_29
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27904..28248)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EUY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG36911.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L3_131_000M1_scaffold_488_30
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28261..29241)
DNA (981bp) protein (327aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G7E1_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Displaying items 1-30 of 64 in total

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