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L3_131_000M1_scaffold_589

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_589_1
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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15..1148
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=2 Tax=Oscillibacter RepID=U2QEY1_9FIRM
L3_131_000M1_scaffold_589_2
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1223..1612
DNA (390bp) protein (130aa)
Preprotein translocase, YajC subunit n=2 Tax=Oscillibacter RepID=U2RWI2_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:ERK54972.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_131_000M1_scaffold_589_3
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1678..2100
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2RN63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK54973.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_131_000M1_scaffold_589_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2465..3100
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QET6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK54936.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_131_000M1_scaffold_589_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3129..4016
DNA (888bp) protein (296aa)
Tyrosine recombinase XerC n=2 Tax=Oscillibacter RepID=U2Q0A3_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
xerD; tyrosine recombinase XerD
L3_131_000M1_scaffold_589_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4309..4782
DNA (474bp) protein (158aa)
Sigma-70, region 4 n=2 Tax=Oscillibacter RepID=U2QFJ4_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:ERK54939.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
RNA polymerase ECF subfamily sigma factor
L3_131_000M1_scaffold_589_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4779..6158
DNA (1380bp) protein (460aa)
Uncharacterized protein (Fragment) n=1 Tax=Oscillibacter sp. KLE 1728 RepID=U2RXW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58073.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_131_000M1_scaffold_589_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6348..6860
DNA (513bp) protein (171aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Oscillibacter RepID=U2QPE8_9FIRM
L3_131_000M1_scaffold_589_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6928..7533
DNA (606bp) protein (202aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ruvA; Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA n=2 Tax=Oscillibacter RepID=U2Q5N6_9FIRM
L3_131_000M1_scaffold_589_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7536..7763
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QGV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58076.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_131_000M1_scaffold_589_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7817..8881
DNA (1065bp) protein (355aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ruvB; Holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Oscillibacter RepID=U2PY24_9FIRM
L3_131_000M1_scaffold_589_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8895..9374
DNA (480bp) protein (160aa)
Uncharacterized protein n=3 Tax=Oscillibacter RepID=U2RWZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58078.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_131_000M1_scaffold_589_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9379..9585)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QGS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58079.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_131_000M1_scaffold_589_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9673..9885
DNA (213bp) protein (71aa)
DNA-binding helix-turn-helix protein n=2 Tax=Oscillibacter RepID=U2PXZ0_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK58080.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
xre; transcriptional regulator
L3_131_000M1_scaffold_589_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10045..10257
DNA (213bp) protein (71aa)
DNA-binding helix-turn-helix protein (Fragment) n=1 Tax=Oscillibacter sp. KLE 1728 RepID=U2QG34_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK58080.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
helix-turn-helix domain-containing protein
L3_131_000M1_scaffold_589_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10407..10619
DNA (213bp) protein (71aa)
DNA-binding helix-turn-helix protein n=2 Tax=Oscillibacter RepID=U2QNK3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK58081.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
helix-turn-helix domain-containing protein
L3_131_000M1_scaffold_589_17
unknown

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comp(10671..11297)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. KLE 1728 RepID=U2QGK9_9FIRM
L3_131_000M1_scaffold_589_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11357..12712
DNA (1356bp) protein (452aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=2 Tax=Oscillibacter RepID=U2QGI4_9FIRM
L3_131_000M1_scaffold_589_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12780..13421
DNA (642bp) protein (214aa)
Putative RNA polymerase sigma-H factor n=2 Tax=Oscillibacter RepID=U2PXR0_9FIRM
Putative RNA polymerase sigma-H factor {ECO:0000313|EMBL:ERK58083.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative RNA polymerase sigma factor
L3_131_000M1_scaffold_589_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13460..13741
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QFV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58084.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_131_000M1_scaffold_589_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13986..14195
DNA (210bp) protein (70aa)
Hydrid cluster protein-associated redox disulfide domain protein n=2 Tax=Oscillibacter RepID=U2Q5P6_9FIRM
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:ERK58085.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_131_000M1_scaffold_589_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14261..14977
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QNK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58086.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_131_000M1_scaffold_589_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14955..15746
DNA (792bp) protein (264aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Oscillibacter RepID=U2QGI6_9FIRM
hypothetical protein
L3_131_000M1_scaffold_589_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15753..16490
DNA (738bp) protein (246aa)
Probable transcriptional regulatory protein HMPREF1545_03672 n=2 Tax=Oscillibacter RepID=U2PXR5_9FIRM
Probable transcriptional regulatory protein HMPREF1546_03785 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_131_000M1_scaffold_589_25
unknown

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comp(16379..16645)
DNA (267bp) protein (89aa)

This feature has no annotations

L3_131_000M1_scaffold_589_26
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16764..17168
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q5Q1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58090.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_131_000M1_scaffold_589_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17195..18205
DNA (1011bp) protein (337aa)
DNA-binding helix-turn-helix protein n=2 Tax=Oscillibacter RepID=U2QNL2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK58091.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Predicted transcriptional regulators
L3_131_000M1_scaffold_589_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19247..20623
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=2 Tax=Oscillibacter RepID=U2QFW3_9FIRM
L3_131_000M1_scaffold_589_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20665..21378
DNA (714bp) protein (238aa)
Sporulation protein YunB n=2 Tax=Oscillibacter RepID=U2QPG5_9FIRM
Sporulation protein YunB {ECO:0000313|EMBL:ERK58094.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_131_000M1_scaffold_589_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21395..23440
DNA (2046bp) protein (682aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ligA; DNA ligase (EC:6.5.1.2)
DNA ligase n=2 Tax=Oscillibacter RepID=U2Q5Q6_9FIRM
Displaying items 1-30 of 60 in total

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