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L3_131_000M1_scaffold_1630

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_1630_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(326..487)
DNA (162bp) protein (54aa)
Uncharacterized protein n=213 Tax=Clostridium difficile RepID=C9XSH5_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG73253.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_131_000M1_scaffold_1630_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(497..994)
DNA (498bp) protein (166aa)
SEC-C motif family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D7P5_CLODI
SEC-C motif family protein {ECO:0000313|EMBL:EQF22595.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L3_131_000M1_scaffold_1630_3
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1076..1780)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4V9U0_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK40479.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
L3_131_000M1_scaffold_1630_4
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1799..2464)
DNA (666bp) protein (222aa)
RNA pseudouridylate synthase family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W9S4_CLOBI
RNA pseudouridylate synthase family protein {ECO:0000313|EMBL:EQK49607.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
pseudouridylate synthase
L3_131_000M1_scaffold_1630_5
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2464..3336)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DUU1_CLOSO
Conserved hypothetical 95 family protein {ECO:0000313|EMBL:EQK40481.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
putative SAM-dependent methyltransferase
L3_131_000M1_scaffold_1630_6
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3555..4292
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036574DA
Uncharacterized protein {ECO:0000313|EMBL:KHS56930.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
uncharacterised protein
L3_131_000M1_scaffold_1630_7
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4338..7544)
DNA (3207bp) protein (1069aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CL80_CLOSO
carB; carbamoyl phosphate synthase large subunit
L3_131_000M1_scaffold_1630_8
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7585..8631)
DNA (1047bp) protein (349aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W9K1_CLOBI
pyrAA1; carbamoyl phosphate synthase small subunit
L3_131_000M1_scaffold_1630_9
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8644..9360)
DNA (717bp) protein (239aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VG41_CLOBI
pyrF; orotidine 5'-phosphate decarboxylase
L3_131_000M1_scaffold_1630_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9734..10561)
DNA (828bp) protein (276aa)
Nitroreductase family protein n=10 Tax=Clostridium difficile RepID=T3G3S5_CLODC
hypothetical protein
Nitroreductase {ECO:0000313|EMBL:CKG68470.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK00312.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_131_000M1_scaffold_1630_11
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10893..12122
DNA (1230bp) protein (410aa)
Aminopeptidase 2 n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W9V0_CLOBI
Peptidase M29 {ECO:0000313|EMBL:KGJ48262.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
aminopeptidase
L3_131_000M1_scaffold_1630_12
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12261..13220)
DNA (960bp) protein (320aa)
kinase n=1 Tax=[Clostridium] glycolicum RepID=UPI00037B659A
Kinase {ECO:0000313|EMBL:KHS55641.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
PfkB family kinase
L3_131_000M1_scaffold_1630_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13414..15804)
DNA (2391bp) protein (797aa)
Homocysteine S-methyltransferase {ECO:0000313|EMBL:CKG68404.1}; EC=2.1.1.13 {ECO:0000313|EMBL:CKG68404.1};; Putative homocysteine S-methyltransferase {ECO:0000313|EMBL:CEK00314.1}; EC=2.1.1.13 {ECO:0000313|EMBL:CEK00314.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
homocysteine S-methyltransferase (EC:2.1.1.13)
Pterin binding enzyme family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D4V5_CLODI
L3_131_000M1_scaffold_1630_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15776..16498)
DNA (723bp) protein (241aa)
Vitamin B12 dependent methionine synthase, activation domain protein n=121 Tax=Clostridium difficile RepID=T3G3Q4_CLODC
S-adenosyl-L-methionine dependent methionine synthase
Vitamin B12 dependent methionine synthase, activation domain protein {ECO:0000313|EMBL:EQG73218.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_131_000M1_scaffold_1630_15
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16504..16959)
DNA (456bp) protein (152aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
S-ribosylhomocysteine lyase n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G241_9FIRM
luxS; S-ribosylhomocysteinase
L3_131_000M1_scaffold_1630_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17173..17898
DNA (726bp) protein (242aa)
PP-loop family protein n=8 Tax=Clostridium difficile RepID=G6B9E8_CLODI
PP-loop family protein {ECO:0000313|EMBL:EHJ28764.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
ATPase
L3_131_000M1_scaffold_1630_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17947..19410)
DNA (1464bp) protein (488aa)
UPI0003D6545A related cluster n=1 Tax=unknown RepID=UPI0003D6545A
Phytoene dehydrogenase {ECO:0000313|EMBL:ETI89474.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
phytoene desaturase
L3_131_000M1_scaffold_1630_18
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19516..20550)
DNA (1035bp) protein (345aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CF11_CLOSO
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_131_000M1_scaffold_1630_19
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20650..21555)
DNA (906bp) protein (302aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Ornithine carbamoyltransferase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CP41_CLOSO
ornithine carbamoyltransferase
Displaying 19 items

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