ggKbase home page

L3_131_000M1_scaffold_3446

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_3446_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(747..935)
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=4 Tax=unclassified Peptostreptococcaceae RepID=T0D0Q8_CLOSO
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
rpmB; 50S ribosomal protein L28
L3_131_000M1_scaffold_3446_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1305..1655
DNA (351bp) protein (117aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=D5Q286_CLODI
Alkaline shock protein {ECO:0000313|EMBL:CEO12597.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_131_000M1_scaffold_3446_3
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1670..3295
DNA (1626bp) protein (542aa)
DAK2 domain fusion YloV family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSR5_CLOBI
DAK2 domain fusion YloV family protein {ECO:0000313|EMBL:EQK43821.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
phosphatase
L3_131_000M1_scaffold_3446_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3407..5467
DNA (2061bp) protein (687aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CCK99022.1}; EC=3.6.1.- {ECO:0000313|EMBL:CCK99022.1};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
ATP-dependent DNA helicase RecG n=4 Tax=Clostridium difficile RepID=U3UFS9_CLODI
recG; ATP-dependent DNA helicase RecG
L3_131_000M1_scaffold_3446_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5503..6060
DNA (558bp) protein (186aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EQF23919.1}; EC=2.1.1.- {ECO:0000313|EMBL:EQF23919.1};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
RNA methyltransferase, RsmD family n=1 Tax=Clostridium difficile CD160 RepID=T3D7M9_CLODI
hypothetical protein
L3_131_000M1_scaffold_3446_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6062..6571
DNA (510bp) protein (170aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
Phosphopantetheine adenylyltransferase n=219 Tax=Clostridium difficile RepID=C9XMS5_CLODC
phosphopantetheine adenylyltransferase
L3_131_000M1_scaffold_3446_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6562..7086
DNA (525bp) protein (175aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=D5Q291_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCK95072.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
hypothetical protein
L3_131_000M1_scaffold_3446_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7100..8314)
DNA (1215bp) protein (405aa)
Putative membrane protein n=167 Tax=Clostridium difficile RepID=T3HY60_CLODC
membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCK97058.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
L3_131_000M1_scaffold_3446_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8383..8895)
DNA (513bp) protein (171aa)
UPF0348 protein HMPREF1122_02008 n=6 Tax=Clostridium difficile RepID=G6B7Y2_CLODI
UPF0348 protein HMPREF1122_02008 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L3_131_000M1_scaffold_3446_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8923..9651)
DNA (729bp) protein (243aa)
UPF0348 protein QEW_1551 n=1 Tax=Clostridium difficile CD160 RepID=T3DE72_CLODI
UPF0348 protein QEW_1551 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L3_131_000M1_scaffold_3446_11
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9934..10380
DNA (447bp) protein (149aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Acetate kinase n=2 Tax=Clostridium bifermentans RepID=T4VJC3_CLOBI
ackA; acetate kinase
Displaying 11 items

View Taxonomy