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L3_131_000M1_scaffold_575

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_575_1
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(161..940)
DNA (780bp) protein (260aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FXA7_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB16750.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
iron-dicitrate ABC transporter ATP-binding protein
L3_131_000M1_scaffold_575_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(948..1928)
DNA (981bp) protein (327aa)
Putative iron-dicitrate transporter subunit FecD n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6Q8_9FIRM
Putative iron-dicitrate transporter subunit FecD {ECO:0000313|EMBL:EDQ97670.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ferrichrome ABC transporter permease subunit
L3_131_000M1_scaffold_575_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1918..2931)
DNA (1014bp) protein (338aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6Q7_9FIRM
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EDQ97669.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
cobalamin Fe3+-siderophores ABC transporter permease
L3_131_000M1_scaffold_575_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2963..3916)
DNA (954bp) protein (318aa)
Periplasmic binding protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6Q6_9FIRM
Periplasmic binding protein {ECO:0000313|EMBL:EDQ97668.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
yfmC; ferrichrome ABC transporter substrate-binding protein
L3_131_000M1_scaffold_575_5
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4491..4844)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VXJ4_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK45551.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
L3_131_000M1_scaffold_575_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4855..5655)
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
proC; Pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0AB18_9FIRM
L3_131_000M1_scaffold_575_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5667..6521)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VTL9_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KIE48416.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L3_131_000M1_scaffold_575_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7127..7549
DNA (423bp) protein (141aa)
Cytidine deaminase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H946_9CLOT
Cytidine deaminase {ECO:0000313|EMBL:EEH99724.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cytidine deaminase
L3_131_000M1_scaffold_575_9
unknown

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comp(7726..8298)
DNA (573bp) protein (191aa)

This feature has no annotations

L3_131_000M1_scaffold_575_10
unknown

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comp(8369..8476)
DNA (108bp) protein (36aa)

This feature has no annotations

L3_131_000M1_scaffold_575_11
unknown

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comp(8511..8999)
DNA (489bp) protein (163aa)

This feature has no annotations

L3_131_000M1_scaffold_575_12
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9205..10359)
DNA (1155bp) protein (385aa)
Amidohydrolase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VR80_CLOBI
Amidohydrolase family protein {ECO:0000313|EMBL:EQK43187.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
amidohydrolase
L3_131_000M1_scaffold_575_13
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10350..11780)
DNA (1431bp) protein (477aa)
C4-dicarboxylate anaerobic carrier n=2 Tax=Clostridiales RepID=B0ACQ6_9FIRM
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KHS58454.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
hypothetical protein
L3_131_000M1_scaffold_575_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12602..15241)
DNA (2640bp) protein (880aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QMB7_9CLOT
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EKY28830.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
plasma-membrane calcium-translocating P-type ATPase
L3_131_000M1_scaffold_575_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15307..15939)
DNA (633bp) protein (211aa)
Bacterial stress protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLN0_9CLOT
Bacterial stress protein {ECO:0000313|EMBL:EKY28831.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Tellurium resistance protein terD,TerD family
L3_131_000M1_scaffold_575_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15952..16536)
DNA (585bp) protein (195aa)
Bacterial stress protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QMR0_9CLOT
Bacterial stress protein {ECO:0000313|EMBL:EKY28832.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
stress response protein, TerZ- and CABP1
L3_131_000M1_scaffold_575_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16562..17170)
DNA (609bp) protein (203aa)
Bacterial stress protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLJ8_9CLOT
Bacterial stress protein {ECO:0000313|EMBL:EKY28833.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
stress response protein, TerZ- and CABP1
L3_131_000M1_scaffold_575_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17207..18685)
DNA (1479bp) protein (493aa)
Toxic anion resistance protein TelA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLH8_9CLOT
Toxic anion resistance protein TelA {ECO:0000313|EMBL:EKY28834.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
toxic anion resistance family protein
L3_131_000M1_scaffold_575_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18700..20229)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QMC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28835.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_131_000M1_scaffold_575_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20641..21561
DNA (921bp) protein (307aa)
Phosphate ABC transporter, permease protein PstC n=1 Tax=Clostridium difficile CD160 RepID=T3D6C3_CLODI
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EQF23013.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
phosphate ABC transporter permease
L3_131_000M1_scaffold_575_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21563..22387
DNA (825bp) protein (275aa)
Phosphate ABC transporter, permease protein PstA n=184 Tax=Clostridium difficile RepID=T3G3Q3_CLODC
pstA; phosphate-specific ABC transporter permease
ABC-type transport system, phosphate-specific permease {ECO:0000313|EMBL:CCL23723.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_131_000M1_scaffold_575_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22411..23172
DNA (762bp) protein (254aa)
pstB; ABC-type transport system, phosphate-specificATP-binding (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
Phosphate ABC transporter, ATP-binding protein n=6 Tax=Clostridium difficile RepID=D5Q7M1_CLODI
L3_131_000M1_scaffold_575_23
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23223..23876
DNA (654bp) protein (218aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CM09_CLOSO
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
phoU; phosphate uptake regulator PhoU
L3_131_000M1_scaffold_575_24
unknown

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23924..24076
DNA (153bp) protein (51aa)

This feature has no annotations

L3_131_000M1_scaffold_575_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24156..25544
DNA (1389bp) protein (463aa)
NADP-specific glutamate dehydrogenase (EC:1.4.1.4)
UPI0003D5D059 related cluster n=1 Tax=unknown RepID=UPI0003D5D059
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L3_131_000M1_scaffold_575_26
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25838..27718)
DNA (1881bp) protein (627aa)
Fusaric acid resistance-like family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E2K1_CLOSO
Membrane protein {ECO:0000313|EMBL:CEO20977.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_131_000M1_scaffold_575_27
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27967..29490
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KHS57338.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
hypothetical protein
L3_131_000M1_scaffold_575_28
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29922..30794
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VGL1_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK40623.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
hypothetical protein
L3_131_000M1_scaffold_575_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31070..31876
DNA (807bp) protein (269aa)
Putative polysaccharide deacetylase {ECO:0000313|EMBL:CCL23718.1}; EC=3.5.1.- {ECO:0000313|EMBL:CCL23718.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Polysaccharide deacetylase family protein n=62 Tax=Clostridium difficile RepID=T2UEA5_CLODI
polysaccharide deacetylase
L3_131_000M1_scaffold_575_30
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


32311..34974
DNA (2664bp) protein (888aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Valine--tRNA ligase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CBX9_CLOSO
valS; valyl-tRNA synthetase
Displaying items 1-30 of 56 in total

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