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L3_131_000M1_scaffold_4326

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_4326_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..296)
DNA (294bp) protein (98aa)
IstB-like ATP binding family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DAS3_CLODI
PhoH-like protein
IstB-like ATP binding family protein {ECO:0000313|EMBL:EQF23942.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
L3_131_000M1_scaffold_4326_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(330..1622)
DNA (1293bp) protein (431aa)
Sporulation protein YqfD n=15 Tax=Clostridium difficile RepID=T2TBS5_CLODI
Sporulation protein YqfD {ECO:0000313|EMBL:EQI80906.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
putative stage IV sporulation protein
L3_131_000M1_scaffold_4326_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1635..1871)
DNA (237bp) protein (79aa)
YabP family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DAR5_CLODI
YabP family protein {ECO:0000313|EMBL:EQF23932.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L3_131_000M1_scaffold_4326_4
unknown

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2097..3086
DNA (990bp) protein (330aa)

This feature has no annotations

L3_131_000M1_scaffold_4326_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3214..3711)
DNA (498bp) protein (166aa)
TspO/MBR family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DBS5_CLODI
TspO/MBR family protein {ECO:0000313|EMBL:EQF24000.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L3_131_000M1_scaffold_4326_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3831..4274)
DNA (444bp) protein (148aa)
Yqey-like family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DBM6_CLODI
Yqey-like family protein {ECO:0000313|EMBL:EQF23960.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
rpsU; tRNA binding protein
L3_131_000M1_scaffold_4326_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4301..4480)
DNA (180bp) protein (60aa)
30S ribosomal protein S21 n=221 Tax=Clostridium difficile RepID=RS21_CLOD6
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
L3_131_000M1_scaffold_4326_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4636..4986)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1P5_9FIRM
HIT domain protein {ECO:0000313|EMBL:EQF23968.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
histidine triad nucleotide-binding protein
L3_131_000M1_scaffold_4326_9
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5096..6397)
DNA (1302bp) protein (434aa)
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CEN96830.1}; EC=2.-.-.- {ECO:0000313|EMBL:CEN96830.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Clostridium difficile CD160 RepID=T3D8Y7_CLODI
radical SAM protein
L3_131_000M1_scaffold_4326_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6398..7150)
DNA (753bp) protein (251aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DZF1_CLOSO
hypothetical protein
L3_131_000M1_scaffold_4326_11
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7159..8097)
DNA (939bp) protein (313aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
prmA; Ribosomal protein L11 methyltransferase (L11Mtase) (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CL99_CLOSO
Displaying 11 items

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