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L3_131_000M1_scaffold_2973

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_2973_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(131..1150)
DNA (1020bp) protein (340aa)
rod shape-determining protein Mbl n=1 Tax=Clostridium difficile RepID=UPI00017F5137
mreB1; rod shape-determining protein Mbl
Cell-shape determining protein {ECO:0000313|EMBL:CDS83090.1}; Rod shape-determining protein Mbl {ECO:0000313|EMBL:CKH81302.1}; Rod shape-determining protein MreB {ECO:0000313|EMBL:CDS82955.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_131_000M1_scaffold_2973_2
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1197..1532)
DNA (336bp) protein (112aa)
Sporulation transcriptional regulator SpoIIID n=10 Tax=Clostridium difficile RepID=T2ZAU7_CLODI
Stage III sporulation protein D {ECO:0000313|EMBL:KHS55603.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
spoIIID; stage III sporulation protein D
L3_131_000M1_scaffold_2973_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1655..2332)
DNA (678bp) protein (226aa)
Peptidase, M23 family n=5 Tax=Clostridium difficile RepID=D5Q959_CLODI
Peptidase, M23 family {ECO:0000313|EMBL:EFH05568.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
cell wall endopeptidase
L3_131_000M1_scaffold_2973_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2427..3452)
DNA (1026bp) protein (342aa)
Stage II sporulation protein D n=6 Tax=Clostridium difficile RepID=D5Q958_CLODI
spoIID; Stage II sporulation protein D
Stage II sporulation protein D {ECO:0000313|EMBL:CCK86937.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
L3_131_000M1_scaffold_2973_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3532..4785)
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=216 Tax=Clostridium difficile RepID=C9XIP5_CLODC
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L3_131_000M1_scaffold_2973_6
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4804..5565)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CV89_CLOSO
Protein of uncharacterised function (DUF1779) {ECO:0000313|EMBL:CEN97331.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_131_000M1_scaffold_2973_7
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5652..7481)
DNA (1830bp) protein (610aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VP28_CLOBI
glmS; glucosamine--fructose-6-phosphate aminotransferase
L3_131_000M1_scaffold_2973_8
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7749..9095)
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VY42_CLOBI
L3_131_000M1_scaffold_2973_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9377..10564)
DNA (1188bp) protein (396aa)
YbbR-like protein n=8 Tax=Clostridium difficile RepID=G6B323_CLODI
hypothetical protein
YbbR-like protein {ECO:0000313|EMBL:EHJ34779.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_131_000M1_scaffold_2973_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10558..11403)
DNA (846bp) protein (282aa)
Uncharacterized protein n=204 Tax=Clostridium difficile RepID=Q18CK0_CLOD6
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE01650.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
Displaying 10 items

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