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L3_131_000M1_scaffold_1301

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_1301_1
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..861
DNA (861bp) protein (287aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Clostridium sp. CAG:389 RepID=R7LRB4_9CLOT
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CDE91085.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
hypothetical protein
L3_131_000M1_scaffold_1301_2
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

858..1694
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6T814_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC69503.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L3_131_000M1_scaffold_1301_3
Coprobacillus sp. CAG:826, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1691..2512
DNA (822bp) protein (274aa)
Putative hydrolase n=1 Tax=Coprobacillus sp. CAG:826 RepID=R7DP80_9FIRM
Putative hydrolase {ECO:0000313|EMBL:CDD91961.1}; TaxID=1262857 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:826.;"
hypothetical protein
L3_131_000M1_scaffold_1301_4
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3236..4630
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UJ46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC70822.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L3_131_000M1_scaffold_1301_5
unknown

Not on your lists

comp(5100..5702)
DNA (603bp) protein (201aa)

This feature has no annotations

L3_131_000M1_scaffold_1301_6
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6089..7120
DNA (1032bp) protein (344aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FYI2_9PROT
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000313|EMBL:CDE20269.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
deoxyguanosinetriphosphate triphosphohydrolase-like protein
L3_131_000M1_scaffold_1301_7
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7117..8892
DNA (1776bp) protein (592aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
DNA primase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G0K4_9PROT
DNA primase, catalytic core
L3_131_000M1_scaffold_1301_8
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9014..10066
DNA (1053bp) protein (351aa)
RNA polymerase sigma factor RpoD n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G2R2_9PROT
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
RNA polymerase sigma factor RpoD
L3_131_000M1_scaffold_1301_9
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10071..10754
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G038_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE20266.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_131_000M1_scaffold_1301_10
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10741..11616
DNA (876bp) protein (292aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FZG0_9PROT
L3_131_000M1_scaffold_1301_11
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11632..12333
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FYH8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE20264.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
L3_131_000M1_scaffold_1301_12
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

12538..13599
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000371F558
alanine racemase
Tax=BJP_IG2158_Actinobacteria_57_21
L3_131_000M1_scaffold_1301_13
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

13586..14188
DNA (603bp) protein (201aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCL5_FUSMR
L3_131_000M1_scaffold_1301_14
unknown

Not on your lists

14396..15136
DNA (741bp) protein (247aa)

This feature has no annotations

L3_131_000M1_scaffold_1301_15
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15183..15725
DNA (543bp) protein (181aa)
RNA methyltransferase RsmD family n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FH91_9FIRM
RNA methyltransferase RsmD family {ECO:0000313|EMBL:CCY04223.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
hypothetical protein
L3_131_000M1_scaffold_1301_16
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15878..16375
DNA (498bp) protein (166aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G232_9PROT
phosphopantetheine adenylyltransferase
L3_131_000M1_scaffold_1301_17
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16413..17435
DNA (1023bp) protein (341aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YKN1_9ACTN
L3_131_000M1_scaffold_1301_18
CG_Cyano_02, Cyanobacteria, Bacteria

Not on your lists

17980..18828
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI00037A6FF9
chorismate mutase
Tax=CG_Cyano_02
L3_131_000M1_scaffold_1301_19
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18940..19992)
DNA (1053bp) protein (351aa)
Sporulation integral membrane protein YlbJ n=1 Tax=Clostridium sp. CAG:354 RepID=R7F751_9CLOT
Sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:CCY04226.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
sporulation integral membrane protein
L3_131_000M1_scaffold_1301_20
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

20076..20864
DNA (789bp) protein (263aa)
Patatin-like phospholipase n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BGH7_DEHSV
patatin-like phospholipase
Patatin-like phospholipase {ECO:0000313|EMBL:ACZ61427.1}; TaxID=311424 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi (strain VS).;"
L3_131_000M1_scaffold_1301_21
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

Not on your lists

20913..22220
DNA (1308bp) protein (436aa)
AAA ATPase central domain protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTW5_9FIRM
AAA ATPase central domain protein {ECO:0000313|EMBL:CDD68548.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
ATPase AAA
L3_131_000M1_scaffold_1301_22
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22320..22766
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000363F48B
NUDIX hydrolase {ECO:0000313|EMBL:CCY73465.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
MutT-like (Nudix) hydrolase
L3_131_000M1_scaffold_1301_23
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22763..23224
DNA (462bp) protein (154aa)
Cof-like hydrolase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A4T7_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:CCX38080.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
GCN5-related N-acetyltransferase
L3_131_000M1_scaffold_1301_24
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23403..23933
DNA (531bp) protein (177aa)
Transcriptional repressor NrdR n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FUZ3_9PROT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ATP-cone domain-containing protein
L3_131_000M1_scaffold_1301_25
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23926..24987
DNA (1062bp) protein (354aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G356_9PROT
L3_131_000M1_scaffold_1301_26
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24974..26497
DNA (1524bp) protein (508aa)
DNA polymerase III alpha subunit Gram-positive type n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G2J9_9PROT
DNA polymerase III alpha subunit Gram-positive type {ECO:0000313|EMBL:CDE21360.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
polC; DNA polymerase III PolC
Displaying 26 items

View Taxonomy