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L3_131_000M1_scaffold_1596

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_1596_1
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..3773
DNA (3771bp) protein (1257aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium sp. CAG:411 RepID=R7I2F3_9CLOT
rpoC; DNA-directed RNA polymerase subunit beta'
L3_131_000M1_scaffold_1596_2
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

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4391..5971
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2C1CC
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CCZ27748.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
hypothetical protein
L3_131_000M1_scaffold_1596_3
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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5952..7649
DNA (1698bp) protein (566aa)
Glycosyl transferase family 39 n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U377_ETHHY
glycosyl transferase family protein
Glycosyl transferase family 39 {ECO:0000313|EMBL:ADU27549.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L3_131_000M1_scaffold_1596_4
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7658..8398
DNA (741bp) protein (247aa)
GtrA family protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2C1CB
Predicted membrane protein {ECO:0000313|EMBL:CCY74533.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
putative cell wall teichoic acid glycosylation protein GtcA
L3_131_000M1_scaffold_1596_5
Coprobacillus sp. CAG:826, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8912..9799)
DNA (888bp) protein (296aa)
Polysaccharide deacetylase n=1 Tax=Coprobacillus sp. CAG:826 RepID=R7DRP2_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CDD92796.1}; TaxID=1262857 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:826.;"
polysaccharide deacetylase
L3_131_000M1_scaffold_1596_6
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9999..10742)
DNA (744bp) protein (248aa)
Transcriptional regulator, DeoR family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPT9_9FIRM
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EDN01864.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
DeoR family transcriptional regulator
L3_131_000M1_scaffold_1596_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10970..12370
DNA (1401bp) protein (467aa)
rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase n=2 Tax=Clostridiales RepID=A7B0D0_RUMGN
Rhamnulokinase {ECO:0000313|EMBL:CCZ67271.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_131_000M1_scaffold_1596_8
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12466..13710
DNA (1245bp) protein (415aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L-rhamnose isomerase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NZA0_9CLOT
L-rhamnose isomerase
L3_131_000M1_scaffold_1596_9
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13919..14773
DNA (855bp) protein (285aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Rhamnulose-1-phosphate aldolase n=2 Tax=Eubacterium RepID=C4Z7T9_EUBE2
rhamnulose-1-phosphate aldolase
L3_131_000M1_scaffold_1596_10
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14798..15115
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEX68753.1}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
L-rhamnose 1-epimerase
L3_131_000M1_scaffold_1596_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15302..16447
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQP2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42574.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_131_000M1_scaffold_1596_12
Thermoanaerobacter mathranii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(16655..17059)
DNA (405bp) protein (135aa)
ATP synthase epsilon chain n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T7J8_THEIA
ATP synthase subunit epsilon
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=583358 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3).;"
L3_131_000M1_scaffold_1596_13
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(17056..18438)
DNA (1383bp) protein (461aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum M0795.;"
ATP synthase subunit beta n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0II47_THETR
ATP synthase, F1 beta subunit
L3_131_000M1_scaffold_1596_14
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18454..19314)
DNA (861bp) protein (287aa)
atpG; F0F1 ATPase subunit gamma AtpG (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AVH1_CLOA9
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L3_131_000M1_scaffold_1596_15
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19311..20867)
DNA (1557bp) protein (519aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
ATP synthase subunit alpha n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRX3_9CLOT
ATP synthase subunit alpha
L3_131_000M1_scaffold_1596_16
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20854..21249)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000370ADD1
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
F0F1 ATP synthase subunit delta
L3_131_000M1_scaffold_1596_17
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21242..21757)
DNA (516bp) protein (172aa)
atpF; ATP synthase F0 subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LDT7_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_131_000M1_scaffold_1596_18
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(21773..21943)
DNA (171bp) protein (57aa)
atpE; ATP synthase F0 subunit C (EC:3.6.3.14)
ATP synthase F0 C subunit n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DW09_9FIRM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Displaying 18 items

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