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L3_131_000M1_scaffold_3002

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_3002_1
unknown

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1..174
DNA (174bp) protein (58aa)

This feature has no annotations

L3_131_000M1_scaffold_3002_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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561..1790
DNA (1230bp) protein (410aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
argG; Argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYG7_9CLOT
L3_131_000M1_scaffold_3002_3
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1826..2752
DNA (927bp) protein (309aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CFX9_9FIRM
L3_131_000M1_scaffold_3002_4
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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2810..4057
DNA (1248bp) protein (416aa)
glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6EGG4_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L3_131_000M1_scaffold_3002_5
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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4157..5014
DNA (858bp) protein (286aa)
argB; Acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase id=4390514 bin=GWF2_Clostridiales_38_85 species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
L3_131_000M1_scaffold_3002_6
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5070..6245
DNA (1176bp) protein (392aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
Acetylornithine aminotransferase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DNG2_9FIRM
succinylornithine transaminase
L3_131_000M1_scaffold_3002_7
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6242..7150
DNA (909bp) protein (303aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KLZ6_9CLOT
L3_131_000M1_scaffold_3002_8
unknown

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7173..7562
DNA (390bp) protein (130aa)

This feature has no annotations

L3_131_000M1_scaffold_3002_9
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7578..8672
DNA (1095bp) protein (365aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
carA; carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Clostridium sp. CAG:217 RepID=R6J4B8_9CLOT
L3_131_000M1_scaffold_3002_10
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8665..11379
DNA (2715bp) protein (905aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
diaminopimelate epimerase (EC:5.1.1.7 6.3.4.16)
Carbamoyl-phosphate synthase large chain/diaminopimelate epimerase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QRN3_9FIRM
L3_131_000M1_scaffold_3002_11
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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11422..11943
DNA (522bp) protein (174aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
carbamoyl-phosphate synthase large chain/diaminopimelate epimerase (EC:5.1.1.7 6.3.5.5)
Carbamoyl-phosphate synthase large chain/diaminopimelate epimerase n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BBS1_9FIRM
Displaying 11 items

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