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L3_131_000M1_scaffold_4713

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_4713_1
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..463
DNA (462bp) protein (154aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
ppnK; ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FFY4_9FIRM
L3_131_000M1_scaffold_4713_2
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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478..930
DNA (453bp) protein (151aa)
Arginine repressor n=1 Tax=Clostridium sp. CAG:349 RepID=R6WCY5_9CLOT
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
argR; arginine repressor
L3_131_000M1_scaffold_4713_3
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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959..2659
DNA (1701bp) protein (567aa)
DNA repair protein RecN n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G3K7_9PROT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
DNA replication and repair protein RecN
L3_131_000M1_scaffold_4713_4
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2743..3765
DNA (1023bp) protein (341aa)
SpoIVB peptidase {ECO:0000313|EMBL:EJF41288.1}; EC=3.4.21.116 {ECO:0000313|EMBL:EJF41288.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
SpoIVB peptidase n=1 Tax=Clostridium sp. MSTE9 RepID=J1H7M0_9CLOT
stage IV sporulation protein B
L3_131_000M1_scaffold_4713_5
unknown

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3813..4412
DNA (600bp) protein (200aa)

This feature has no annotations

L3_131_000M1_scaffold_4713_6
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4483..5754
DNA (1272bp) protein (424aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G3M8_9PROT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDE21561.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
d-ala-d-ala carboxypeptidase dacf; serine peptidase; merops family s11
L3_131_000M1_scaffold_4713_7
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6090..7424
DNA (1335bp) protein (445aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
Diaminopimelate decarboxylase n=7 Tax=Clostridium thermocellum RepID=A3DD89_CLOTH
diaminopimelate decarboxylase
L3_131_000M1_scaffold_4713_8
unknown

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7531..7635
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 8 items

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