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L3_131_000M1_scaffold_2352

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_2352_1
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(36..1349)
DNA (1314bp) protein (438aa)
GTPase Der n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FZD1_9PROT
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
engA; EngA
L3_131_000M1_scaffold_2352_2
unknown

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comp(1490..1798)
DNA (309bp) protein (103aa)

This feature has no annotations

L3_131_000M1_scaffold_2352_3
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(1870..2412)
DNA (543bp) protein (181aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
uracil phosphoribosyltransferase n=1 Tax=Desulfitobacterium hafniense RepID=UPI0003706E1B
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium hydrogeniformans (Halanaerobium sp. (strain; sapolanicus)).;"
L3_131_000M1_scaffold_2352_4
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2417..3364)
DNA (948bp) protein (316aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G4P5_9PROT
L3_131_000M1_scaffold_2352_5
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(3368..3988)
DNA (621bp) protein (207aa)
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=525283 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. nucleatum ATCC 23726.;"
Lipoprotein signal peptidase n=2 Tax=Fusobacterium nucleatum RepID=LSPA_FUSNN
L3_131_000M1_scaffold_2352_6
unknown

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comp(4140..4691)
DNA (552bp) protein (184aa)

This feature has no annotations

L3_131_000M1_scaffold_2352_7
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4691..6148)
DNA (1458bp) protein (486aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G5A3_9PROT
putative nicotinate phosphoribosyltransferase
L3_131_000M1_scaffold_2352_8
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6145..7365)
DNA (1221bp) protein (407aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
lgt3; prolipoprotein diacylglyceryl transferase Lgt (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium sp. BL8 RepID=T0PFB3_9CLOT
L3_131_000M1_scaffold_2352_9
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7483..8199)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AJ96_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA51025.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
hypothetical protein
L3_131_000M1_scaffold_2352_10
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8499..9185
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G4K6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE22085.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_131_000M1_scaffold_2352_11
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9179..9556
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G5P5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE22083.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
L3_131_000M1_scaffold_2352_12
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9776..11056)
DNA (1281bp) protein (427aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LB78_RUMC1
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL16873.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_131_000M1_scaffold_2352_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11070..14108)
DNA (3039bp) protein (1013aa)
CoA-substrate-specific enzyme activase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAT9_9FIRM
CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:CDC64961.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
putative CoA-substrate-specific enzyme activase
L3_131_000M1_scaffold_2352_14
unknown

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comp(14359..14712)
DNA (354bp) protein (118aa)

This feature has no annotations

L3_131_000M1_scaffold_2352_15
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14729..15280)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QXD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF42333.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
UDP-N-acetylglucosamine pyrophosphorylase
Displaying 15 items

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