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L3_131_000M1_scaffold_2730

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_2730_1
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3..188)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Treponema denticola RepID=M2DNS7_TREDN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMB23399.1}; TaxID=999434 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola OTK.;"
L3_131_000M1_scaffold_2730_2
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(205..756)
DNA (552bp) protein (184aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
Putative Holliday junction resolvase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FVT3_9PROT
Holliday junction resolvase YqgF
L3_131_000M1_scaffold_2730_3
unknown

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comp(917..1189)
DNA (273bp) protein (91aa)

This feature has no annotations

L3_131_000M1_scaffold_2730_4
unknown

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comp(1214..1348)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_131_000M1_scaffold_2730_5
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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1472..1912
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BRK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD68466.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
hypothetical protein
L3_131_000M1_scaffold_2730_6
unknown

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2034..2450
DNA (417bp) protein (139aa)

This feature has no annotations

L3_131_000M1_scaffold_2730_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3523..3969
DNA (447bp) protein (149aa)
Putative DNA-binding protein n=2 Tax=Clostridium botulinum B RepID=B2TKJ5_CLOBB
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:ACD22761.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_131_000M1_scaffold_2730_8
unknown

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comp(4089..4364)
DNA (276bp) protein (92aa)

This feature has no annotations

L3_131_000M1_scaffold_2730_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4519..5127)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FX68_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCX49278.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_131_000M1_scaffold_2730_10
unknown

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5212..6117
DNA (906bp) protein (302aa)

This feature has no annotations

L3_131_000M1_scaffold_2730_11
unknown

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comp(6344..7216)
DNA (873bp) protein (291aa)

This feature has no annotations

L3_131_000M1_scaffold_2730_12
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(7878..8738)
DNA (861bp) protein (287aa)
Phosphatidylserine decarboxylase (EC:4.1.1.65)
phosphatidylserine decarboxylase-related protein id=3610024 bin=GWF2_Clostridiales_36_10 species=Ruminococcus flavefaciens genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L3_131_000M1_scaffold_2730_13
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8735..9412)
DNA (678bp) protein (226aa)
Phosphatidylserine synthase (EC:2.7.8.8)
CDP-diacylglycerol-serine O-phosphatidyltransferase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0003025B5B
Tax=BJP_IG2157_Clostridiales_52_13
L3_131_000M1_scaffold_2730_14
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9396..10484)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NJK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF13644.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
hypothetical protein
L3_131_000M1_scaffold_2730_15
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11225..11596)
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridium sp. CAG:349 RepID=R6WQA1_9CLOT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
50S ribosomal protein L12
L3_131_000M1_scaffold_2730_16
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


comp(11637..12146)
DNA (510bp) protein (170aa)
50S ribosomal protein L10 n=1 Tax=Parvimonas sp. oral taxon 393 str. F0440 RepID=F9PR19_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
50S ribosomal protein L10
L3_131_000M1_scaffold_2730_17
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12457..13140)
DNA (684bp) protein (228aa)
50S ribosomal protein L1 n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FWB6_9PROT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
50S ribosomal protein L1
L3_131_000M1_scaffold_2730_18
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13200..13625)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FZL0_9PROT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
50S ribosomal protein L11
L3_131_000M1_scaffold_2730_19
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13797..14360)
DNA (564bp) protein (188aa)
Transcription termination/antitermination protein NusG n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FWB1_9PROT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
NusG antitermination factor
L3_131_000M1_scaffold_2730_20
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14375..14596)
DNA (222bp) protein (74aa)
Protein translocase subunit SecE n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FWR0_9PROT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
preprotein translocase subunit SecE
L3_131_000M1_scaffold_2730_21
unknown

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comp(15056..15481)
DNA (426bp) protein (142aa)

This feature has no annotations

L3_131_000M1_scaffold_2730_22
unknown

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comp(15468..15542)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 22 items

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