ggKbase home page

L3_131_000M1_scaffold_1511

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_1511_1
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..199
DNA (198bp) protein (66aa)
Internalin-J n=1 Tax=Clostridium sp. CAG:354 RepID=R7FB37_9CLOT
Internalin-J {ECO:0000313|EMBL:CDE11678.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_131_000M1_scaffold_1511_2
unknown

Not on your lists

209..421
DNA (213bp) protein (71aa)

This feature has no annotations

L3_131_000M1_scaffold_1511_3
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(496..1350)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9Q6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11585.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L3_131_000M1_scaffold_1511_4
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1578..1862
DNA (285bp) protein (95aa)
30S ribosomal protein S6 n=1 Tax=Clostridium sp. CAG:354 RepID=R7FA91_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
30S ribosomal protein S6
L3_131_000M1_scaffold_1511_5
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1902..2324
DNA (423bp) protein (141aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FCY1_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
single-strand binding protein
L3_131_000M1_scaffold_1511_6
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2345..2620
DNA (276bp) protein (92aa)
30S ribosomal protein S18 n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAS9_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
rpsR; 30S ribosomal protein S18
L3_131_000M1_scaffold_1511_7
unknown

Not on your lists

2774..2998
DNA (225bp) protein (75aa)

This feature has no annotations

L3_131_000M1_scaffold_1511_8
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3074..4069)
DNA (996bp) protein (332aa)
IstB domain protein ATP-binding protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9R2_9CLOT
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:CDE11590.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
DNA replication protein DnaC
L3_131_000M1_scaffold_1511_9
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4081..5043)
DNA (963bp) protein (321aa)
Primosome DnaD subunit n=1 Tax=Clostridium sp. CAG:354 RepID=R7FA95_9CLOT
Primosome DnaD subunit {ECO:0000313|EMBL:CDE11591.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
DNA replication protein DnaD
L3_131_000M1_scaffold_1511_10
Clostridium sp. CAG:508, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5142..5444)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:508 RepID=R6QIR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC30801.1}; TaxID=1262815 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:508.;"
L3_131_000M1_scaffold_1511_11
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5441..6316)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FCY7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11592.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_131_000M1_scaffold_1511_12
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6321..6608)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11593.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_131_000M1_scaffold_1511_13
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6652..8334)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F8G4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11594.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_131_000M1_scaffold_1511_14
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8599..8784
DNA (186bp) protein (62aa)
Hydrid cluster protein-associated redox disulfide domain protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FA99_9CLOT
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:CDE11596.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hydroxylamine reductase
L3_131_000M1_scaffold_1511_15
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9279..10004
DNA (726bp) protein (242aa)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAT8_9CLOT
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDE11598.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
short chain dehydrogenase
L3_131_000M1_scaffold_1511_16
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10090..10569)
DNA (480bp) protein (160aa)
Carbohydrate binding domain (Family 25) n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9S4_9CLOT
Carbohydrate binding domain (Family 25) {ECO:0000313|EMBL:CDE11600.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
carbohydrate-binding protein
L3_131_000M1_scaffold_1511_17
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10706..11323)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FCZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11602.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
XRE family transcriptional regulator
L3_131_000M1_scaffold_1511_18
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11423..13213
DNA (1791bp) protein (597aa)
VanW family protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAU3_9CLOT
VanW family protein {ECO:0000313|EMBL:CDE11603.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
VanW family protein
L3_131_000M1_scaffold_1511_19
unknown

Not on your lists

comp(13530..13676)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_131_000M1_scaffold_1511_20
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13804..14070
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F8H6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11604.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_131_000M1_scaffold_1511_21
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14103..15362
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11606.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
peptidase M48
L3_131_000M1_scaffold_1511_22
unknown

Not on your lists

15513..15605
DNA (93bp) protein (31aa)

This feature has no annotations

L3_131_000M1_scaffold_1511_23
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15731..20692
DNA (4962bp) protein (1654aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE11608.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_131_000M1_scaffold_1511_24
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20696..23080
DNA (2385bp) protein (795aa)
collagen adhesion protein (EC:6.1.1.11)
Peptidoglycan anchored protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F8I2_9CLOT
Peptidoglycan anchored protein {ECO:0000313|EMBL:CDE11609.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
Displaying 24 items

View Taxonomy