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L3_131_000M1_scaffold_1187

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_1187_1
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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268..3816
DNA (3549bp) protein (1183aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B100_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI65885.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_131_000M1_scaffold_1187_2
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3886..4290)
DNA (405bp) protein (135aa)
Rrf2 family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRF7_9FIRM
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:KJF39976.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
transcriptional regulator, BadM/Rrf2 family
L3_131_000M1_scaffold_1187_3
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4532..6034
DNA (1503bp) protein (501aa)
Bacterial extracellular solute-binding protein family 5 n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AFP7_9CLOT
Bacterial extracellular solute-binding protein family 5 {ECO:0000313|EMBL:CCX38176.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
family 5 extracellular solute-binding protein
L3_131_000M1_scaffold_1187_4
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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6097..7038
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y8D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30190.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
dipeptide/oligopeptide/nickel ABC transporter permease
L3_131_000M1_scaffold_1187_5
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7150..7956
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A8F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38174.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
dipeptide/oligopeptide/nickel ABC transporter permease
L3_131_000M1_scaffold_1187_6
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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7953..8954
DNA (1002bp) protein (334aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZIB5_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD30192.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
peptide ABC transporter ATP-binding protein
L3_131_000M1_scaffold_1187_7
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8947..9945
DNA (999bp) protein (333aa)
Oligopeptide/dipeptide ABC transporter ATPase subunit n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPU3_9CLOT
Oligopeptide/dipeptide ABC transporter ATPase subunit {ECO:0000313|EMBL:CDA78728.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
peptide ABC transporter substrate-binding protein
L3_131_000M1_scaffold_1187_8
Treponema sp. JC4, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(9982..11337)
DNA (1356bp) protein (452aa)
multidrug transporter MATE n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B53431
Putative efflux protein, MATE family {ECO:0000313|EMBL:EID86116.1}; TaxID=1124982 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema sp. JC4.;"
putative efflux protein, MATE family
L3_131_000M1_scaffold_1187_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11439..13076)
DNA (1638bp) protein (546aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B4974B
Beta-lactamase class C and other penicillin binding proteins
Beta-lactamase class C and other penicillin binding proteins {ECO:0000313|EMBL:CBL09370.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_1187_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13304..14794
DNA (1491bp) protein (497aa)
ABC-type sugar transport system, periplasmic component n=3 Tax=Roseburia RepID=D4KX96_9FIRM
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CDA54735.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_131_000M1_scaffold_1187_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15032..16003
DNA (972bp) protein (324aa)
ABC-type polysaccharide transport system, permease component n=4 Tax=Roseburia RepID=D4KR65_9FIRM
ABC-type polysaccharide transport system, permease component
ABC-type polysaccharide transport system, permease component {ECO:0000313|EMBL:CBL11988.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_000M1_scaffold_1187_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16019..16861
DNA (843bp) protein (281aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=4 Tax=Roseburia RepID=D4KR64_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL09366.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_000M1_scaffold_1187_13
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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16957..18321
DNA (1365bp) protein (455aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EVJ8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDB01159.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
MATE efflux family protein
L3_131_000M1_scaffold_1187_14
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18361..19011
DNA (651bp) protein (217aa)
Phosphoglycolate phosphatase n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VSM4_9FIRM
Phosphoglycolate phosphatase {ECO:0000313|EMBL:CCZ83517.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
phosphoglycolate phosphatase
L3_131_000M1_scaffold_1187_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19055..19453)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GC97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00544.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_131_000M1_scaffold_1187_16
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20413..20730
DNA (318bp) protein (106aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia sp. CAG:471 RepID=R7EBI6_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDD98872.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L3_131_000M1_scaffold_1187_17
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20730..23372
DNA (2643bp) protein (881aa)
Heavy-metal transporting P-type ATPase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T241_ROSHA
Heavy-metal transporting P-type ATPase {ECO:0000313|EMBL:AEN95826.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
heavy-metal transporting P-type ATPase
L3_131_000M1_scaffold_1187_18
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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23599..24414
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CB91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA62567.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_131_000M1_scaffold_1187_19
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24404..26629
DNA (2226bp) protein (742aa)
Signal transduction histidine kinase n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LWE6_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CBL21949.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Signal transduction histidine kinase
L3_131_000M1_scaffold_1187_20
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26653..28824
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JT71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE66821.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Signal transduction histidine kinase
Displaying 20 items

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