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L3_131_000M1_scaffold_340

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_340_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(145..1905)
DNA (1761bp) protein (587aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3AHV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98628.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Subtilase family.
L3_131_000M1_scaffold_340_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1986..4148)
DNA (2163bp) protein (721aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z9U5_EUBR3
Uncharacterized protein {ECO:0000313|EMBL:ACR73943.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
hypothetical protein
L3_131_000M1_scaffold_340_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4203..5516)
DNA (1314bp) protein (438aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0V1_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95945.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_131_000M1_scaffold_340_4
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5476..5940)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R6C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF45633.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
L3_131_000M1_scaffold_340_5
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(5940..6746)
DNA (807bp) protein (269aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HAP1_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCY21826.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
binding-protein-dependent transport systems inner membrane component
L3_131_000M1_scaffold_340_6
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(6739..7629)
DNA (891bp) protein (297aa)
ABC transporter inner membrane protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HA72_9FIRM
ABC transporter inner membrane protein {ECO:0000313|EMBL:CCY21827.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
ABC transporter inner membrane protein
L3_131_000M1_scaffold_340_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(7786..9081)
DNA (1296bp) protein (432aa)
Extracellular solute-binding protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GX68_9FIRM
Extracellular solute-binding protein {ECO:0000313|EMBL:CCY21828.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
extracellular solute-binding protein
L3_131_000M1_scaffold_340_8
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9416..10270
DNA (855bp) protein (285aa)
AraC family transcriptional regulator n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0U6_ROSHA
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AEN95940.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_131_000M1_scaffold_340_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10345..11808)
DNA (1464bp) protein (488aa)
ATP-dependent Clp protease, ATP-binding subunit ClpX n=2 Tax=Dorea RepID=A6BKF3_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000313|EMBL:CDE18910.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
L3_131_000M1_scaffold_340_10
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12050..13060)
DNA (1011bp) protein (337aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CKF6_9CLOT
L3_131_000M1_scaffold_340_11
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13191..13790)
DNA (600bp) protein (200aa)
Acetolactate synthase, small (regulatory) subunit (EC:2.2.1.6)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37291.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L3_131_000M1_scaffold_340_12
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14050..15480
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JS66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61564.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Bacillus/Clostridium GerA spore germination protein.
L3_131_000M1_scaffold_340_13
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15600..16445
DNA (846bp) protein (282aa)
GCN5-related N-acetyltransferase n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3EK03_GEOS4
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACX65826.1}; TaxID=481743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Geobacillus sp. (strain Y412MC10).;"
L3_131_000M1_scaffold_340_14
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(16512..17531)
DNA (1020bp) protein (340aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
rsgA2; putative ribosome biogenesis GTPase RsgA 1 (EC:3.6.1.-)
ribosome small subunit-dependent GTPase A n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B5BAC6
L3_131_000M1_scaffold_340_15
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17675..18676)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JIV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS34043.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_131_000M1_scaffold_340_16
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18755..19273)
DNA (519bp) protein (173aa)
NUDIX hydrolase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A5G7_9CLOT
NUDIX hydrolase {ECO:0000313|EMBL:CCX38350.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
NUDIX hydrolase
L3_131_000M1_scaffold_340_17
unknown

Not on your lists

19444..19893
DNA (450bp) protein (150aa)

This feature has no annotations

L3_131_000M1_scaffold_340_18
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20100..21002)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N9L7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80009.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
ABC transporter permease subunit
L3_131_000M1_scaffold_340_19
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21006..21809)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N0K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS76805.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L3_131_000M1_scaffold_340_20
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21815..22615)
DNA (801bp) protein (267aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CDC3_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI67237.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ABC transporter
L3_131_000M1_scaffold_340_21
Paenibacillus sp. FSL R5-0345, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22912..23973)
DNA (1062bp) protein (354aa)
amidohydrolase n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00037D3CCE
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AIQ33205.1}; TaxID=1536770 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-0345.;"
L3_131_000M1_scaffold_340_22
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24029..24805)
DNA (777bp) protein (259aa)
ABC transporter n=1 Tax=Paenibacillus polymyxa CR1 RepID=V5WYE8_PAEPO
ABC transporter
ABC transporter {ECO:0000313|EMBL:AHC20471.1}; TaxID=1429244 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa CR1.;"
L3_131_000M1_scaffold_340_23
Paenibacillus sp. FSL P4-0081, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24848..25642)
DNA (795bp) protein (265aa)
Peptide ABC transporter ATPase n=1 Tax=Paenibacillus polymyxa CR1 RepID=V5WXR4_PAEPO
peptide ABC transporter ATPase
Peptide ABC transporter ATPase {ECO:0000313|EMBL:AIQ29899.1}; TaxID=1536769 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL P4-0081.;"
L3_131_000M1_scaffold_340_24
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25668..26492)
DNA (825bp) protein (275aa)
nickel ABC transporter permease n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI00037D34ED
peptide ABC transporter permease
Peptide ABC transporter permease {ECO:0000313|EMBL:CQR56057.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
L3_131_000M1_scaffold_340_25
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26549..27499)
DNA (951bp) protein (317aa)
Peptide ABC transporter permease n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7W4L8_PAETH
peptide ABC transporter permease
Peptide ABC transporter permease {ECO:0000313|EMBL:AIQ16823.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
L3_131_000M1_scaffold_340_26
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27489..29045)
DNA (1557bp) protein (519aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI0003761218
Bacterial extracellular solute-binding s, 5 Middle family protein {ECO:0000313|EMBL:KFN00962.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
peptide ABC transporter substrate-binding protein
L3_131_000M1_scaffold_340_27
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29352..30497
DNA (1146bp) protein (382aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSB2_9CLOT
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:KJJ69573.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L3_131_000M1_scaffold_340_28
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30512..31564)
DNA (1053bp) protein (351aa)
UPI0003D60FD3 related cluster n=1 Tax=unknown RepID=UPI0003D60FD3
Uncharacterized protein {ECO:0000313|EMBL:ETJ01904.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
hypothetical protein
L3_131_000M1_scaffold_340_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31564..32196)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98665.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_131_000M1_scaffold_340_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32283..33170
DNA (888bp) protein (296aa)
RNAse Z (EC:3.1.26.11)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INL3_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CCY43763.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Displaying items 1-30 of 60 in total

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