ggKbase home page

L3_131_000M1_scaffold_506

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_506_1
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

143..2086
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HC56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22447.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
glutaminase
L3_131_000M1_scaffold_506_2
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2104..3225
DNA (1122bp) protein (374aa)
4Fe-4S binding domain protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NRK5_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEF94198.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
Uncharacterized Fe-S center protein
L3_131_000M1_scaffold_506_3
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3282..6509)
DNA (3228bp) protein (1076aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large subunit n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9H7_9CLOT
L3_131_000M1_scaffold_506_4
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6623..8659)
DNA (2037bp) protein (679aa)
Glycosyl hydrolase, family 31 n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AUK7_9CLOT
Glycosyl hydrolase, family 31 {ECO:0000313|EMBL:ERI69539.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
family 31 glucosidase
L3_131_000M1_scaffold_506_5
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8823..9761
DNA (939bp) protein (313aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9ST70_CLOC7
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADL50686.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_131_000M1_scaffold_506_6
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9850..11463
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5KCI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY58682.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L3_131_000M1_scaffold_506_7
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11777..14230
DNA (2454bp) protein (818aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
Valine-tRNA ligase n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JU73_9FIRM
valyl-tRNA synthetase
L3_131_000M1_scaffold_506_8
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14346..15083
DNA (738bp) protein (246aa)
Fructose-2,6-bisphosphatase (EC:5.4.2.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6DVB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA88186.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
L3_131_000M1_scaffold_506_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15256..15705
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQ69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30279.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_131_000M1_scaffold_506_10
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15698..17050
DNA (1353bp) protein (451aa)
Multidrug resistance protein MATE family n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZFE8_9FIRM
Multidrug resistance protein MATE family {ECO:0000313|EMBL:CDA38543.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
multidrug resistance protein, MATE family
L3_131_000M1_scaffold_506_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17157..17600
DNA (444bp) protein (148aa)
YhcH/YjgK/YiaL family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AMS0_9CLOT
YhcH/YjgK/YiaL family protein {ECO:0000313|EMBL:EFC96877.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L3_131_000M1_scaffold_506_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17604..19121
DNA (1518bp) protein (506aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
propionate CoA-transferase (EC:2.8.3.1)
Acetate CoA-transferase YdiF n=1 Tax=Dorea longicatena CAG:42 RepID=R7G4J6_9FIRM
L3_131_000M1_scaffold_506_13
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19222..20355
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CP31_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48488.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
exonuclease SbcD
L3_131_000M1_scaffold_506_14
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20352..24098
DNA (3747bp) protein (1249aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JVM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE67696.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
hypothetical protein
L3_131_000M1_scaffold_506_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24137..25207
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2KVX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPC05155.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
acetyl xylan esterase
L3_131_000M1_scaffold_506_16
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25396..26271
DNA (876bp) protein (292aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GB95_9FIRM
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:CCY14610.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
MoxR-like ATPase
L3_131_000M1_scaffold_506_17
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26284..27921
DNA (1638bp) protein (546aa)
VWA containing CoxE family protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CGZ6_DESK7
Uncharacterized protein {ECO:0000313|EMBL:KIE51333.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
von Willebrand factor A
L3_131_000M1_scaffold_506_18
unknown

Not on your lists

27951..30116
DNA (2166bp) protein (722aa)

This feature has no annotations

L3_131_000M1_scaffold_506_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30178..31197
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5II54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41848.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PfkB domain-containing protein
L3_131_000M1_scaffold_506_20
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31312..31770
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R8K4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EIC96012.1}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
septicolysin
L3_131_000M1_scaffold_506_21
unknown

Not on your lists

comp(32064..32276)
DNA (213bp) protein (71aa)

This feature has no annotations

L3_131_000M1_scaffold_506_22
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32310..33215)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CHW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66931.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_131_000M1_scaffold_506_23
Toxoplasma gondii, Toxoplasma, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(33339..34283)
DNA (945bp) protein (315aa)
Viral A-type inclusion protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2EN31_TRIVA
Uncharacterized protein {ECO:0000313|EMBL:EPR63535.1}; TaxID=507601 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasma.;" source="Toxoplasma gondii GT1.;"
hypothetical protein
L3_131_000M1_scaffold_506_24
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34557..35123
DNA (567bp) protein (189aa)
integrase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B31B57
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDC73894.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
phage integrase family protein
L3_131_000M1_scaffold_506_25
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(35218..36477)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EHQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX90849.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Predicted aminopeptidases
L3_131_000M1_scaffold_506_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36670..37458
DNA (789bp) protein (263aa)
Delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AWL4_9FIRM
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:CDA55405.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
delta-lactam-biosynthetic de-N-acetylase
L3_131_000M1_scaffold_506_27
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37591..38454
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY85_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97673.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_131_000M1_scaffold_506_28
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38598..40973
DNA (2376bp) protein (792aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Phosphoketolase (EC:4.1.2.22)
Probable phosphoketolase n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E7F5_9FIRM
L3_131_000M1_scaffold_506_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41147..42214)
DNA (1068bp) protein (356aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6N6_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCZ79116.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AraC-type DNA-binding domain-containing proteins
L3_131_000M1_scaffold_506_30
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42220..43446)
DNA (1227bp) protein (409aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Roseburia sp. CAG:303 RepID=R7IXK8_9FIRM
Displaying items 1-30 of 45 in total

View Taxonomy