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L3_131_000M1_scaffold_946

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_946_1
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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2..988
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BF79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA62918.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_131_000M1_scaffold_946_2
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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948..1937
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XEC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL18786.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
ATP-binding protein
L3_131_000M1_scaffold_946_3
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1985..2629
DNA (645bp) protein (215aa)
Response regulator receiver domain protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D0M0_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX73723.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_131_000M1_scaffold_946_4
unknown

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2666..4177
DNA (1512bp) protein (504aa)

This feature has no annotations

L3_131_000M1_scaffold_946_5
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5134..7212
DNA (2079bp) protein (693aa)
Glycogen debranching enzyme n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KKX2_CLOPH
glycogen debranching protein
Glycogen debranching enzyme {ECO:0000313|EMBL:ABX42704.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_131_000M1_scaffold_946_6
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7209..7862
DNA (654bp) protein (218aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium sp. CAG:277 RepID=R7K172_9CLOT
L3_131_000M1_scaffold_946_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7959..9908
DNA (1950bp) protein (650aa)
Alpha-L-arabinofuranosidase (EC:3.2.1.55)
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:CBL09057.1}; EC=3.2.1.55 {ECO:0000313|EMBL:CBL09057.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Alpha-L-arabinofuranosidase n=2 Tax=Roseburia intestinalis RepID=D4KQA5_9FIRM
L3_131_000M1_scaffold_946_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10026..10850
DNA (825bp) protein (275aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L-rhamnulose 1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVU1_9FIRM
L3_131_000M1_scaffold_946_9
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10872..12020
DNA (1149bp) protein (383aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRY0_9FIRM
Lactaldehyde reductase {ECO:0000313|EMBL:CCZ94122.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
L3_131_000M1_scaffold_946_10
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12107..12862
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000368A7D6
GTP pyrophosphokinase {ECO:0000313|EMBL:KHS56962.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
GTP pyrophosphokinase
L3_131_000M1_scaffold_946_11
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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12847..13458
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EEV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX89864.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Chromate transport protein ChrA
L3_131_000M1_scaffold_946_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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13455..14024
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58389.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Chromate transport protein ChrA
L3_131_000M1_scaffold_946_13
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14148..14762
DNA (615bp) protein (205aa)
Fructose-2,6-bisphosphatase (EC:5.4.2.1)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MCU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68849.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L3_131_000M1_scaffold_946_14
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14781..16619
DNA (1839bp) protein (613aa)
Endoglucanase {ECO:0000256|RuleBase:RU361153}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361153};; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
celA; cellulase CelA (EC:3.2.1.4)
Endoglucanase n=1 Tax=Clostridium sp. CAG:632 RepID=R5K1B8_9CLOT
L3_131_000M1_scaffold_946_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16735..17415)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59357.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted Fe-S-cluster oxidoreductase
L3_131_000M1_scaffold_946_16
unknown

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17561..17815
DNA (255bp) protein (85aa)

This feature has no annotations

L3_131_000M1_scaffold_946_17
unknown

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17924..19066
DNA (1143bp) protein (381aa)

This feature has no annotations

L3_131_000M1_scaffold_946_18
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

19143..20282
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PZX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29100.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
excisionase
L3_131_000M1_scaffold_946_19
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20496..20888
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GMU0_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37153.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_131_000M1_scaffold_946_20
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20861..22642
DNA (1782bp) protein (594aa)
PepF/M3 family oligoendopeptidase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R4T2_9FIRM
PepF/M3 family oligoendopeptidase {ECO:0000313|EMBL:CDF44891.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
pepF/M3 family oligoendopeptidase
L3_131_000M1_scaffold_946_21
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23226..25208
DNA (1983bp) protein (661aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6C7Q9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA69119.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L3_131_000M1_scaffold_946_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25531..26343
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CAT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD24513.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Uncharacterized protein involved in copper resistance
L3_131_000M1_scaffold_946_23
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26775..27773
DNA (999bp) protein (333aa)
MreB/Mrl family cell shape determining protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IVB1_9FIRM
MreB/Mrl family cell shape determining protein {ECO:0000313|EMBL:EOS25756.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
rod shape-determining protein MreB
L3_131_000M1_scaffold_946_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27793..30096
DNA (2304bp) protein (768aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
RecD/TraA family helicase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IAU1_9CLOT
L3_131_000M1_scaffold_946_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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30083..30799
DNA (717bp) protein (239aa)
ComF family protein n=2 Tax=Clostridium RepID=D3AE19_9CLOT
ComF family protein {ECO:0000313|EMBL:EFC99940.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
phosphoribosyltransferase
L3_131_000M1_scaffold_946_26
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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31121..32791
DNA (1671bp) protein (557aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9INR5_9FIRM
hypothetical protein
L3_131_000M1_scaffold_946_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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32793..33482
DNA (690bp) protein (230aa)
Two-component system response regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNZ3_9FIRM
Two-component system response regulator {ECO:0000313|EMBL:CCZ79800.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
two-component system response regulator
L3_131_000M1_scaffold_946_28
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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33518..34168
DNA (651bp) protein (217aa)
HAD hydrolase family IA n=1 Tax=Bacteroides sp. CAG:189 RepID=R5JPT7_9BACE
HAD hydrolase, family IA {ECO:0000313|EMBL:EIY59821.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
phosphatase
L3_131_000M1_scaffold_946_29
unknown

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34658..34828
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying 29 items

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