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L3_131_000M1_scaffold_2265

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_2265_1
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(107..835)
DNA (729bp) protein (243aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DXU6_9FIRM
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CCX83749.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
short-chain dehydrogenase/reductase SDR
L3_131_000M1_scaffold_2265_2
Monosiga brevicollis, Monosiga, Choanoflagellida, Eukaryota

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1072..3276
DNA (2205bp) protein (735aa)
Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V6E6_MONBE
Predicted protein {ECO:0000313|EMBL:EDQ86868.1}; TaxID=81824 species="Eukaryota; Choanoflagellida; Codonosigidae; Monosiga.;" source="Monosiga brevicollis (Choanoflagellate).;"
N-acetylmuramoyl-L-alanine amidase, C-terminus
L3_131_000M1_scaffold_2265_3
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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3416..4777
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J8G1_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR01420.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
K+ transport systems, NAD-binding component
L3_131_000M1_scaffold_2265_4
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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4814..6265
DNA (1452bp) protein (484aa)
Cation transport protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YC55_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR01421.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Trk-type K+ transport systems, membrane components
L3_131_000M1_scaffold_2265_5
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(6332..7342)
DNA (1011bp) protein (337aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
aspartate--ammonia ligase, AsnA-type (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GW68_9FIRM
L3_131_000M1_scaffold_2265_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(7429..8679)
DNA (1251bp) protein (417aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IXX1_9FIRM
L3_131_000M1_scaffold_2265_7
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8700..9476)
DNA (777bp) protein (259aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QH84_9FIRM
L3_131_000M1_scaffold_2265_8
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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9680..10513
DNA (834bp) protein (278aa)
Formate transporter n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7AW18_9FIRM
Formate transporter {ECO:0000313|EMBL:CDD45782.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
formate transporter
L3_131_000M1_scaffold_2265_9
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(10575..10982)
DNA (408bp) protein (136aa)
DNA-binding helix-turn-helix protein id=4129768 bin=GWF2_Clostridiales_36_10 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Predicted transcription factor, homolog of eukaryotic MBF1
Tax=GWF2_Clostridiales_36_10_curated
L3_131_000M1_scaffold_2265_10
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(10982..11347)
DNA (366bp) protein (122aa)
Predicted transcription factor, homolog of eukaryotic MBF1
DNA-binding helix-turn-helix protein id=4129768 bin=GWF2_Clostridiales_36_10 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L3_131_000M1_scaffold_2265_11
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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11651..13129
DNA (1479bp) protein (493aa)
NLP/P60 n=1 Tax=Thermoanaerobacter ethanolicus RepID=Q0PH29_THEET
NLP/P60 {ECO:0000313|EMBL:ABH06552.1}; TaxID=1757 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter ethanolicus (Clostridium thermohydrosulfuricum).;"
NLP/P60 protein
L3_131_000M1_scaffold_2265_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13131..13910)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8Y1_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75212.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_131_000M1_scaffold_2265_13
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14068..14742
DNA (675bp) protein (225aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G897_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY13388.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
helix-turn-helix domain-containing protein
L3_131_000M1_scaffold_2265_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14774..15652
DNA (879bp) protein (293aa)
Sulfate permease n=1 Tax=Clostridium sp. CAG:7 RepID=R5IEY9_9CLOT
Sulfate permease {ECO:0000313|EMBL:CCY40635.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Sulfate permease and related transporters (MFS superfamily)
L3_131_000M1_scaffold_2265_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16096..16299
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPL7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95036.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Displaying 15 items

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