ggKbase home page

L3_131_000M1_scaffold_177

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_177_1
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..4016)
DNA (4014bp) protein (1338aa)
Cna protein B-type domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4D9_9FIRM
Cna protein B-type domain protein {ECO:0000313|EMBL:EDM52182.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_131_000M1_scaffold_177_2
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4025..4984)
DNA (960bp) protein (320aa)
SCP-like protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KTL1_9FIRM
SCP-like protein {ECO:0000313|EMBL:CCY70195.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
Beta-mannanase
L3_131_000M1_scaffold_177_3
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5150..5329)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5LAC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY70196.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
L3_131_000M1_scaffold_177_4
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5337..5750)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5LB30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY70197.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
hypothetical protein
L3_131_000M1_scaffold_177_5
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5751..6680)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KTP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY70198.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
plasmid segregation actin-type ATPase ParM
L3_131_000M1_scaffold_177_6
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6728..6988)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4D4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52177.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_131_000M1_scaffold_177_7
unknown

Not on your lists

comp(7031..7237)
DNA (207bp) protein (69aa)

This feature has no annotations

L3_131_000M1_scaffold_177_8
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7824..8918)
DNA (1095bp) protein (365aa)
Elongation factor Ts n=2 Tax=root RepID=A5Z3L8_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
elongation factor EF-Ts
L3_131_000M1_scaffold_177_9
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8945..9673)
DNA (729bp) protein (243aa)
30S ribosomal protein S2 n=2 Tax=root RepID=A5Z3L7_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
rpsB; 30S ribosomal protein S2
L3_131_000M1_scaffold_177_10
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9959..12037)
DNA (2079bp) protein (693aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3L6_9FIRM
L3_131_000M1_scaffold_177_11
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12071..13072)
DNA (1002bp) protein (334aa)
DNA protecting protein DprA n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3L5_9FIRM
DNA protecting protein DprA {ECO:0000313|EMBL:EDM52505.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
DNA protecting protein DprA
L3_131_000M1_scaffold_177_12
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13075..14574)
DNA (1500bp) protein (500aa)
Mg chelatase-like protein n=2 Tax=root RepID=A5Z3L4_9FIRM
Mg chelatase-like protein {ECO:0000313|EMBL:EDM52504.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Mg chelatase subunit ChlI
L3_131_000M1_scaffold_177_13
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14732..15367)
DNA (636bp) protein (212aa)
RNA polymerase sigma factor n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3L3_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
RNA polymerase, sigma 27/28 subunit, RpsK/SigK
L3_131_000M1_scaffold_177_14
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15497..16723)
DNA (1227bp) protein (409aa)
Peptidase, U32 family {ECO:0000313|EMBL:EDM52502.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDM52502.1};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Peptidase, U32 family n=2 Tax=root RepID=A5Z3L2_9FIRM
protease
L3_131_000M1_scaffold_177_15
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16792..17436)
DNA (645bp) protein (215aa)
Methyltransferase domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3L1_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EDM52501.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Predicted O-methyltransferase
L3_131_000M1_scaffold_177_16
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17438..17848)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52500.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
YceG-like family.
L3_131_000M1_scaffold_177_17
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17890..19584)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52499.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
beta-lactamase domain-containing protein
L3_131_000M1_scaffold_177_18

Not on your lists

comp(19721..19984)
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=root RepID=A5Z3K7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKC66057.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_131_000M1_scaffold_177_19

Not on your lists

comp(20065..20505)
DNA (441bp) protein (147aa)
Holliday junction resolvase YqgF n=1 Tax=human gut metagenome RepID=K1U3L1_9ZZZZ
Holliday junction resolvase YqgF {ECO:0000313|EMBL:EKC66056.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
conserved hypothetical protein TIGR00250
L3_131_000M1_scaffold_177_20
unknown

Not on your lists

comp(20526..20654)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_131_000M1_scaffold_177_21
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20710..20970)
DNA (261bp) protein (87aa)
UPF0297 protein EUBVEN_00251 n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3K5_9FIRM
UPF0297 protein EUBVEN_00251 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_131_000M1_scaffold_177_22
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21034..22347)
DNA (1314bp) protein (438aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
tRNA methylthiotransferase YqeV n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3K4_9FIRM
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EDM52494.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_131_000M1_scaffold_177_23
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22470..22700
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52493.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
phosphotransferase system, phosphocarrier protein HPr
L3_131_000M1_scaffold_177_24
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22832..24010)
DNA (1179bp) protein (393aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Probable tRNA sulfurtransferase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3K2_9FIRM
thiazole biosynthesis/tRNA modification protein ThiI
L3_131_000M1_scaffold_177_25
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24051..25205)
DNA (1155bp) protein (385aa)
cysteine desulfurase (EC:2.8.1.7)
Aminotransferase, class V n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3K1_9FIRM
Aminotransferase, class V {ECO:0000313|EMBL:EDM52491.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_131_000M1_scaffold_177_26
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25260..25997)
DNA (738bp) protein (246aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=2 Tax=root RepID=A5Z3K0_9FIRM
L3_131_000M1_scaffold_177_27
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26014..26970)
DNA (957bp) protein (319aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Ribosomal protein L11 methyltransferase n=4 Tax=root RepID=A5Z3J9_9FIRM
hypothetical protein
L3_131_000M1_scaffold_177_28
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27236..28600
DNA (1365bp) protein (455aa)
MATE efflux family protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3J8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDM52488.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
putative efflux protein, MATE family
L3_131_000M1_scaffold_177_29
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28675..29838)
DNA (1164bp) protein (388aa)
Chaperone protein DnaJ n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3J7_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
chaperone protein DnaJ
L3_131_000M1_scaffold_177_30
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29932..31788)
DNA (1857bp) protein (619aa)
Chaperone protein DnaK n=2 Tax=root RepID=A5Z3J6_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
2-alkenal reductase
Displaying items 1-30 of 93 in total

View Taxonomy