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L3_131_000M1_scaffold_873

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_873_1
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(153..1001)
DNA (849bp) protein (283aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Purine nucleoside phosphorylase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3U7_9FIRM
purine nucleoside phosphorylase I
L3_131_000M1_scaffold_873_2
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1313..2227
DNA (915bp) protein (305aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3U8_9FIRM
L3_131_000M1_scaffold_873_3
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2224..2664
DNA (441bp) protein (147aa)
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein {ECO:0000313|EMBL:EDM52340.1}; EC=2.1.3.2 {ECO:0000313|EMBL:EDM52340.1};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3U9_9FIRM
aspartate carbamoyltransferase regulatory subunit
L3_131_000M1_scaffold_873_4
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2881..4191
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52341.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_131_000M1_scaffold_873_5
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4370..4726
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52342.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_131_000M1_scaffold_873_6
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4852..4992
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YVV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA28739.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
hypothetical protein
L3_131_000M1_scaffold_873_7
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5106..6440
DNA (1335bp) protein (445aa)
Six-Cys-in-45 modification radical SAM protein n=2 Tax=root RepID=A5Z3V2_9FIRM
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:EDM52343.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_131_000M1_scaffold_873_8
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6445..8679
DNA (2235bp) protein (745aa)
Export membrane protein SecD n=2 Tax=root RepID=A5Z3V3_9FIRM
Export membrane protein SecD {ECO:0000313|EMBL:EDM52344.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
protein translocase subunit secF/protein translocase subunit secD
L3_131_000M1_scaffold_873_9
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8747..10501
DNA (1755bp) protein (585aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EDM52345.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDM52345.1};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
recJ; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3V4_9FIRM
L3_131_000M1_scaffold_873_10
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10600..11124
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3V5_9FIRM
L3_131_000M1_scaffold_873_11
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11146..13425
DNA (2280bp) protein (760aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3V6_9FIRM
RelA/SpoT family protein {ECO:0000313|EMBL:EDM52347.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_131_000M1_scaffold_873_12
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13492..14115
DNA (624bp) protein (208aa)
Metallo-beta-lactamase domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3V7_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDM52348.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Zn-dependent hydrolases, including glyoxylases
L3_131_000M1_scaffold_873_13
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14115..15596
DNA (1482bp) protein (494aa)
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:EDM52349.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EDM52349.1};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3V8_9FIRM
L3_131_000M1_scaffold_873_14
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15656..16915
DNA (1260bp) protein (420aa)
Putative histidine--tRNA ligase n=2 Tax=root RepID=A5Z3V9_9FIRM
Putative histidine--tRNA ligase {ECO:0000313|EMBL:EDM52350.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
histidine--tRNA ligase
L3_131_000M1_scaffold_873_15
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16956..18746
DNA (1791bp) protein (597aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EDM52351.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EDM52351.1};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3W0_9FIRM
L3_131_000M1_scaffold_873_16
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18863..19684)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3W1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52352.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_131_000M1_scaffold_873_17
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19843..20496)
DNA (654bp) protein (218aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3W2_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EDM52353.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
putative phosphatase/phosphohexomutase
L3_131_000M1_scaffold_873_18
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20778..22019
DNA (1242bp) protein (414aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Serine hydroxymethyltransferase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3W3_9FIRM
glyA; serine hydroxymethyltransferase
L3_131_000M1_scaffold_873_19
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22204..22605
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52355.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_131_000M1_scaffold_873_20
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22682..23779)
DNA (1098bp) protein (366aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3W5_9FIRM
L3_131_000M1_scaffold_873_21
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23938..25074
DNA (1137bp) protein (379aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=2 Tax=root RepID=A5Z3W6_9FIRM
L3_131_000M1_scaffold_873_22
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25087..25386
DNA (300bp) protein (100aa)
Preprotein translocase, YajC subunit n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3W7_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EDM52358.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
preprotein translocase subunit YajC
L3_131_000M1_scaffold_873_23
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25864..26946
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3W8_9FIRM
L3_131_000M1_scaffold_873_24
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27016..28683
DNA (1668bp) protein (556aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3W9_9FIRM
L3_131_000M1_scaffold_873_25
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28705..30396
DNA (1692bp) protein (564aa)
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:EDM52361.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EDM52361.1};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Acetolactate synthase, large subunit, biosynthetic type n=2 Tax=root RepID=A5Z3X0_9FIRM
acetolactate synthase
L3_131_000M1_scaffold_873_26
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30441..31562
DNA (1122bp) protein (374aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3X1_9FIRM
L3_131_000M1_scaffold_873_27
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31628..32791
DNA (1164bp) protein (388aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EDM52363.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EDM52363.1};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3X2_9FIRM
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
L3_131_000M1_scaffold_873_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33016..33813
DNA (798bp) protein (266aa)
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) (EC:2.7.7.13)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4P6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43902.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_131_000M1_scaffold_873_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33849..34922
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUB0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43904.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
GHMP kinase
L3_131_000M1_scaffold_873_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34945..35544
DNA (600bp) protein (200aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4F3_9CLOT
HAD-superfamily hydrolase
Displaying items 1-30 of 33 in total

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