ggKbase home page

L3_131_000M1_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_220_1
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

648..2669
DNA (2022bp) protein (674aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00035D12E6
Uncharacterized protein {ECO:0000313|EMBL:AFL77219.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
hypothetical protein
L3_131_000M1_scaffold_220_2
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3099..3269
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI0002898E09
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77218.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_220_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3270..4781)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PUL4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20346.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
KAP family P-loop domain-containing protein
L3_131_000M1_scaffold_220_4
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5379..6281
DNA (903bp) protein (301aa)
Site-specific recombinase, phage integrase family n=1 Tax=Alistipes sp. HGB5 RepID=E4MC49_9BACT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFR57482.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
phage integrase
L3_131_000M1_scaffold_220_5
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6278..6820
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000289721C
hypothetical protein
Tax=GWE2_Bacteroidetes_39_28_curated
L3_131_000M1_scaffold_220_6
unknown

Not on your lists

comp(6799..7578)
DNA (780bp) protein (260aa)

This feature has no annotations

L3_131_000M1_scaffold_220_7
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7762..8712)
DNA (951bp) protein (317aa)
Uncharacterized protein n=3 Tax=Bacteroides dorei RepID=I8WBY4_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY36140.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
L3_131_000M1_scaffold_220_8
unknown

Not on your lists

comp(8930..9376)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI0002897FA7
L3_131_000M1_scaffold_220_9
unknown

Not on your lists

comp(9384..9944)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000289A288
L3_131_000M1_scaffold_220_10
unknown

Not on your lists

comp(9958..10848)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI0002885211
L3_131_000M1_scaffold_220_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11835..13082)
DNA (1248bp) protein (416aa)
Site-specific recombinase, phage integrase family n=1 Tax=Alistipes sp. HGB5 RepID=E4MC40_9BACT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFR57561.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_131_000M1_scaffold_220_12
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13747..14829
DNA (1083bp) protein (361aa)
RND family efflux transporter MFP subunit n=1 Tax=Alistipes sp. CAG:53 RepID=R5WMP4_9BACT
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:CCZ97196.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
RND family efflux transporter, MFP subunit
L3_131_000M1_scaffold_220_13
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14842..17883
DNA (3042bp) protein (1014aa)
Cation/multidrug efflux pump n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IP43_9BACT
Cation/multidrug efflux pump
Cation/multidrug efflux pump {ECO:0000313|EMBL:CBK64705.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_220_14
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17880..19223
DNA (1344bp) protein (448aa)
Outer membrane protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IP42_9BACT
Outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:CBK64704.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_220_15
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19878..20327
DNA (450bp) protein (150aa)
thioredoxin n=1 Tax=Alistipes sp. JC136 RepID=UPI000288544D
thioredoxin
Thioredoxin {ECO:0000313|EMBL:CCZ97193.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_131_000M1_scaffold_220_16
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20327..20521
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5WXG8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ97192.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_131_000M1_scaffold_220_17
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20514..20867
DNA (354bp) protein (118aa)
Transcriptional regulators n=2 Tax=Alistipes RepID=D4IP39_9BACT
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK64701.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_220_18
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20944..21648)
DNA (705bp) protein (235aa)
Transcriptional regulators n=2 Tax=Alistipes RepID=D4IP38_9BACT
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK64700.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_220_19
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21946..23541
DNA (1596bp) protein (532aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Putative indolepyruvate ferredoxin oxidoreductase alpha subunit n=1 Tax=Alistipes sp. CAG:53 RepID=R5WAQ2_9BACT
indolepyruvate ferredoxin oxidreductase subunit alpha/beta
L3_131_000M1_scaffold_220_20
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23738..24325
DNA (588bp) protein (196aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit (EC:1.2.7.8)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases gamma subunit n=1 Tax=Alistipes sp. CAG:53 RepID=R5W237_9BACT
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases gamma subunit {ECO:0000313|EMBL:CCZ97188.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_131_000M1_scaffold_220_21
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24322..25632
DNA (1311bp) protein (437aa)
Aspartate/tyrosine/aromatic aminotransferase n=2 Tax=Alistipes RepID=D4IP36_9BACT
Aspartate/tyrosine/aromatic aminotransferase
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:CBK64698.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_220_22
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25640..26935
DNA (1296bp) protein (432aa)
Acetyl-CoA hydrolase n=1 Tax=Alistipes sp. CAG:53 RepID=R5WMN9_9BACT
Acetyl-CoA hydrolase {ECO:0000313|EMBL:CCZ97186.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Acetyl-CoA hydrolase
L3_131_000M1_scaffold_220_23
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26981..27634
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI000318FFBB
HAD hydrolase family IA variant 1 {ECO:0000313|EMBL:CDC95664.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
phosphatase
L3_131_000M1_scaffold_220_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27867..28556
DNA (690bp) protein (230aa)
ABC transporter ATP-binding protein n=1 Tax=Alistipes sp. JC136 RepID=UPI0002880CDD
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDD25690.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
antimicrobial peptide ABC transporter ATPase
L3_131_000M1_scaffold_220_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28553..29812
DNA (1260bp) protein (420aa)
antimicrobial peptide ABC transporter permease n=1 Tax=Alistipes sp. JC136 RepID=UPI00028840C6
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD25689.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
antimicrobial peptide ABC transporter permease
L3_131_000M1_scaffold_220_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29993..31252
DNA (1260bp) protein (420aa)
antimicrobial peptide ABC transporter permease n=1 Tax=Alistipes sp. JC136 RepID=UPI0002883E3D
ABC-type antimicrobial peptide transport system permease component {ECO:0000313|EMBL:CDD25688.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
antimicrobial peptide ABC transporter permease
L3_131_000M1_scaffold_220_27
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31283..32395
DNA (1113bp) protein (371aa)
RND transporter MFP subunit n=1 Tax=Alistipes sp. JC136 RepID=UPI000288A426
RND family efflux transporter MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AFL76895.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_131_000M1_scaffold_220_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32414..33811
DNA (1398bp) protein (466aa)
membrane protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000288B19B
Outer membrane protein {ECO:0000313|EMBL:CDD25686.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
outer membrane protein
L3_131_000M1_scaffold_220_29
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34181..35842
DNA (1662bp) protein (554aa)
Predicted permease n=1 Tax=Alistipes sp. CAG:53 RepID=R5WAP8_9BACT
Predicted permease {ECO:0000313|EMBL:CCZ97184.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Predicted permease
L3_131_000M1_scaffold_220_30
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35811..37232)
DNA (1422bp) protein (474aa)
Small-conductance mechanosensitive channel n=1 Tax=Alistipes sp. CAG:53 RepID=R5W232_9BACT
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:CCZ97183.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Small-conductance mechanosensitive channel
Displaying items 1-30 of 124 in total

View Taxonomy