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L3_131_000M1_scaffold_640

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_640_1
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..922
DNA (921bp) protein (307aa)
heme ABC transporter ATP-binding protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000289EF2B
ATPase components of ABC transporters with duplicated ATPase domains
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CBK63167.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_640_2
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1062..2405
DNA (1344bp) protein (448aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Histidine--tRNA ligase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJQ4_9BACT
L3_131_000M1_scaffold_640_3
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2510..4081
DNA (1572bp) protein (524aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
C-terminal peptidase (Prc) n=1 Tax=Alistipes sp. CAG:53 RepID=R5VZI6_9BACT
C-terminal peptidase (Prc) {ECO:0000313|EMBL:CCZ95865.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_131_000M1_scaffold_640_4
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4181..4477
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5WJ69_9BACT
Protein of unknown function (DUF3276).
Uncharacterized protein {ECO:0000313|EMBL:CBK63164.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_640_5
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5007..5948
DNA (942bp) protein (314aa)
Predicted membrane protein n=2 Tax=Alistipes RepID=D4IJQ1_9BACT
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CCZ95867.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_131_000M1_scaffold_640_6
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5952..6689
DNA (738bp) protein (246aa)
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Alistipes sp. CAG:53 RepID=R5VY78_9BACT
Shikimate dehydrogenase {ECO:0000313|EMBL:CCZ95868.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_131_000M1_scaffold_640_7
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6720..7466
DNA (747bp) protein (249aa)
TonB family C-terminal domain n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJP9_9BACT
TonB family C-terminal domain
TonB family C-terminal domain {ECO:0000313|EMBL:CBK63161.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_640_8
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7511..7867)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5VZJ1_9BACT
Protein of unknown function (DUF2007).
Uncharacterized protein {ECO:0000313|EMBL:CBK63160.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_640_9
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7920..11729
DNA (3810bp) protein (1270aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170, ECO:0000313|EMBL:CBK63159.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=2 Tax=Alistipes RepID=D4IJP7_9BACT
L3_131_000M1_scaffold_640_10
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11767..12081
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Alistipes sp. CAG:53 RepID=R5W3M4_9BACT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
thioredoxin
L3_131_000M1_scaffold_640_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12081..13073
DNA (993bp) protein (331aa)
Galactose mutarotase and related enzymes n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJP6_9BACT
Galactose mutarotase and related enzymes
Galactose mutarotase and related enzymes {ECO:0000313|EMBL:CBK63158.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_640_12
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13125..13643)
DNA (519bp) protein (173aa)
Nitroreductase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJP5_9BACT
Nitroreductase
Nitroreductase {ECO:0000313|EMBL:CBK63157.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_640_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13896..15956
DNA (2061bp) protein (687aa)
heat shock protein Hsp90 n=1 Tax=Alistipes senegalensis RepID=UPI00037DB14D
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDD25724.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
molecular chaperone of HSP90 family
L3_131_000M1_scaffold_640_14
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16107..17984
DNA (1878bp) protein (626aa)
Thioredoxin n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJP4_9BACT
Thioredoxin.
Thioredoxin {ECO:0000313|EMBL:CBK63156.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_640_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18080..19720)
DNA (1641bp) protein (547aa)
ATPase components of ABC transporters with duplicated ATPase domains n=2 Tax=Alistipes RepID=D4IJP3_9BACT
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CBK63155.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_131_000M1_scaffold_640_16
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19939..20349)
DNA (411bp) protein (137aa)
Acyl-CoA thioester hydrolase YbgC/YbaW family n=1 Tax=Alistipes sp. CAG:53 RepID=R5WUJ0_9BACT
Acyl-CoA thioester hydrolase YbgC/YbaW family {ECO:0000313|EMBL:CCZ96147.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
YbgC/YbaW family acyl-CoA thioester hydrolase
L3_131_000M1_scaffold_640_17
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20654..21217)
DNA (564bp) protein (188aa)
FAD synthase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJP2_9BACT
FAD synthase
FAD synthase {ECO:0000313|EMBL:CBK63154.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_640_18
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21240..21887)
DNA (648bp) protein (216aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Alistipes sp. CAG:53 RepID=R5W0C7_9BACT
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
AT-rich DNA-binding protein
L3_131_000M1_scaffold_640_19
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21895..23688)
DNA (1794bp) protein (598aa)
ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJP1_9BACT
ABC-type branched-chain amino acid transport systems, periplasmic component {ECO:0000313|EMBL:CBK63153.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
ABC-type branched-chain amino acid transport systems, periplasmic component
L3_131_000M1_scaffold_640_20
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23718..24485)
DNA (768bp) protein (256aa)
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases (EC:2.7.7.7)
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases n=2 Tax=Alistipes RepID=D4IJP0_9BACT
DNA polymerase III epsilon subunit and related 3'-5' exonucleases {ECO:0000313|EMBL:CCZ96143.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_131_000M1_scaffold_640_21
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24496..25620)
DNA (1125bp) protein (375aa)
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
DNA polymerase III subunit beta n=2 Tax=Alistipes RepID=D4IJN9_9BACT
L3_131_000M1_scaffold_640_22
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25654..26532)
DNA (879bp) protein (293aa)
Uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase {ECO:0000313|EMBL:CBK63150.1}; EC=2.4.2.3 {ECO:0000313|EMBL:CBK63150.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Uridine phosphorylase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJN8_9BACT
L3_131_000M1_scaffold_640_23
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26647..28035
DNA (1389bp) protein (463aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:CBK63149.1}; EC=5.4.2.8 {ECO:0000313|EMBL:CBK63149.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Phosphomannomutase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJN7_9BACT
L3_131_000M1_scaffold_640_24
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28040..28486
DNA (447bp) protein (149aa)
Putative lipoprotein NlpE involved in copper resistance n=1 Tax=Alistipes sp. CAG:53 RepID=R5W7N3_9BACT
Putative lipoprotein NlpE involved in copper resistance {ECO:0000313|EMBL:CCZ96139.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
lipoprotein NlpE
L3_131_000M1_scaffold_640_25
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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28487..29854
DNA (1368bp) protein (456aa)
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases n=1 Tax=Alistipes sp. CAG:53 RepID=R5VZ13_9BACT
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases {ECO:0000313|EMBL:CCZ96138.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
L3_131_000M1_scaffold_640_26
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29856..30638
DNA (783bp) protein (261aa)
Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (EC:3.1.3.25)
Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family {ECO:0000313|EMBL:CBK63147.1}; EC=3.1.3.25 {ECO:0000313|EMBL:CBK63147.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJN5_9BACT
L3_131_000M1_scaffold_640_27
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30774..32618
DNA (1845bp) protein (615aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000313|EMBL:CBK63146.1};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJN4_9BACT
L3_131_000M1_scaffold_640_28
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32695..33657)
DNA (963bp) protein (321aa)
Esterase/lipase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJN2_9BACT
Esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:CBK63144.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_640_29
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33659..34339)
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJN1_9BACT
conserved hypothetical protein TIGR02453
Uncharacterized protein {ECO:0000313|EMBL:CBK63143.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_640_30
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34341..35621)
DNA (1281bp) protein (427aa)
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBK63142.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBK63142.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Serine hydroxymethyltransferase n=2 Tax=Alistipes RepID=D4IJN0_9BACT
Displaying items 1-30 of 42 in total

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