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L3_131_000M1_scaffold_861

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_861_1
unknown

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1..537
DNA (537bp) protein (179aa)

This feature has no annotations

L3_131_000M1_scaffold_861_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(420..3410)
DNA (2991bp) protein (997aa)
Helicase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XXK4_9BACT
Helicase {ECO:0000313|EMBL:CDD26375.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
helicase
L3_131_000M1_scaffold_861_3
unknown

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3816..4058
DNA (243bp) protein (81aa)

This feature has no annotations

L3_131_000M1_scaffold_861_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4086..4730
DNA (645bp) protein (215aa)
Conserved domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRN4_9BACT
Conserved domain protein {ECO:0000313|EMBL:CDD26373.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_131_000M1_scaffold_861_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4769..6199)
DNA (1431bp) protein (477aa)
Plasmid recombination enzyme n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z784_9BACT
Plasmid recombination enzyme {ECO:0000313|EMBL:CDD26372.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Plasmid recombination enzyme.
L3_131_000M1_scaffold_861_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6425..7306)
DNA (882bp) protein (294aa)
DNA primase (EC:2.7.7.-)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6YCL4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26371.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_131_000M1_scaffold_861_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7422..8468)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XXK0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26370.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_131_000M1_scaffold_861_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8471..8761)
DNA (291bp) protein (97aa)
DNA binding domain, excisionase family n=8 Tax=Bacteroidales RepID=A7A9K9_9PORP
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EKN31116.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
DNA binding domain, excisionase family
L3_131_000M1_scaffold_861_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8891..9775)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000380C397
Uncharacterized protein {ECO:0000313|EMBL:CDD26368.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_131_000M1_scaffold_861_10
unknown

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10035..10172
DNA (138bp) protein (46aa)

This feature has no annotations

L3_131_000M1_scaffold_861_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10355..11548)
DNA (1194bp) protein (398aa)
recombinase n=1 Tax=Alistipes onderdonkii RepID=UPI0003790618
Phage integrase family protein {ECO:0000313|EMBL:EXZ81669.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
integrase
L3_131_000M1_scaffold_861_12
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11721..12644)
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5WV93_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ96402.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_131_000M1_scaffold_861_13
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12646..13095)
DNA (450bp) protein (150aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Alistipes senegalensis RepID=UPI0002E2A327
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK63085.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_861_14
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13126..16119)
DNA (2994bp) protein (998aa)
Fibronectin type III domain n=1 Tax=Alistipes sp. CAG:53 RepID=R5W147_9BACT
Fibronectin type III domain {ECO:0000313|EMBL:CCZ96405.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Fibronectin type III domain.
L3_131_000M1_scaffold_861_15
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16109..17560)
DNA (1452bp) protein (484aa)
Na+/proline symporter n=1 Tax=Alistipes sp. CAG:53 RepID=R5WKR2_9BACT
Na+/proline symporter {ECO:0000313|EMBL:CCZ96406.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Na+/proline symporter
L3_131_000M1_scaffold_861_16
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17734..18222
DNA (489bp) protein (163aa)
Large-conductance mechanosensitive channel n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJG9_9BACT
large conductance mechanosensitive channel protein
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_861_17
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18285..18962)
DNA (678bp) protein (226aa)
Ion channel n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJG0_9BACT
Ion channel.
Ion channel {ECO:0000313|EMBL:CBK63072.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_861_18
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19271..19879
DNA (609bp) protein (203aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Peptide deformylase n=1 Tax=Alistipes sp. CAG:53 RepID=R5W160_9BACT
peptide deformylase
L3_131_000M1_scaffold_861_19
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20091..21854)
DNA (1764bp) protein (588aa)
pyruvate dehydrogenase (cytochrome) (EC:1.2.2.2)
Pyruvate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:CBK63074.1}; EC=1.2.2.2 {ECO:0000313|EMBL:CBK63074.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Pyruvate dehydrogenase (Cytochrome) n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJG2_9BACT
L3_131_000M1_scaffold_861_20
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21962..23818)
DNA (1857bp) protein (619aa)
Pyruvate/oxaloacetate carboxyltransferase (EC:4.1.1.3)
Pyruvate/oxaloacetate carboxyltransferase n=2 Tax=Alistipes RepID=D4IJG3_9BACT
Pyruvate/oxaloacetate carboxyltransferase {ECO:0000313|EMBL:CCZ96414.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_131_000M1_scaffold_861_21
unknown

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comp(23889..23981)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_131_000M1_scaffold_861_22
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23978..25096)
DNA (1119bp) protein (373aa)
Predicted permease n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJG4_9BACT
Predicted permease
Predicted permease {ECO:0000313|EMBL:CBK63076.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_861_23
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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25392..28676
DNA (3285bp) protein (1095aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJG5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK63077.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein
L3_131_000M1_scaffold_861_24
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(28748..29335)
DNA (588bp) protein (196aa)
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=2 Tax=Alistipes RepID=D4IJG6_9BACT
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CBK63078.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_861_25
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29364..30449
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJG7_9BACT
Protein of unknown function (DUF2776).
Uncharacterized protein {ECO:0000313|EMBL:CBK63079.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_861_26
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(30585..32111)
DNA (1527bp) protein (509aa)
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJD8_9BACT
L3_131_000M1_scaffold_861_27
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(32274..34895)
DNA (2622bp) protein (874aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJD9_9BACT
L3_131_000M1_scaffold_861_28
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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34995..36017
DNA (1023bp) protein (341aa)
Membrane proteins related to metalloendopeptidases n=1 Tax=Alistipes sp. CAG:53 RepID=R5VXR2_9BACT
Membrane proteins related to metalloendopeptidases {ECO:0000313|EMBL:CCZ95688.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Membrane proteins related to metalloendopeptidases
L3_131_000M1_scaffold_861_29
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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36019..36969
DNA (951bp) protein (317aa)
Membrane proteins related to metalloendopeptidases n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJE1_9BACT
Membrane proteins related to metalloendopeptidases
Membrane proteins related to metalloendopeptidases {ECO:0000313|EMBL:CBK63053.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_131_000M1_scaffold_861_30
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37022..37702
DNA (681bp) protein (227aa)
HAD hydrolase family IA variant 3 n=1 Tax=Alistipes sp. CAG:53 RepID=R5VZ10_9BACT
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CCZ95690.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
haloacid dehalogenase superfamily protein
Displaying 30 items

View Taxonomy