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L3_131_244G1_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_244G1_scaffold_25_1
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..123
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RLV5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA57470.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
putative phage protein
L3_131_244G1_scaffold_25_2
unknown

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519..956
DNA (438bp) protein (146aa)

This feature has no annotations

L3_131_244G1_scaffold_25_3
unknown

Not on your lists

964..1362
DNA (399bp) protein (133aa)

This feature has no annotations

L3_131_244G1_scaffold_25_4
unknown

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1375..1797
DNA (423bp) protein (141aa)

This feature has no annotations

L3_131_244G1_scaffold_25_5
unknown

Not on your lists

comp(1926..2036)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_131_244G1_scaffold_25_6
unknown

Not on your lists

2758..2922
DNA (165bp) protein (55aa)

This feature has no annotations

L3_131_244G1_scaffold_25_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3077..3559
DNA (483bp) protein (161aa)
NH2-acetyltransferase n=2 Tax=Clostridium butyricum RepID=B1R2B5_CLOBU
NH2-acetyltransferase {ECO:0000313|EMBL:EEP56440.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
NH2-acetyltransferase
L3_131_244G1_scaffold_25_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3749..4495
DNA (747bp) protein (249aa)
polysaccharide deacetylase n=1 Tax=Clostridium botulinum RepID=UPI0003700BD1
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:AIY79739.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
polysaccharide deacetylase family protein
L3_131_244G1_scaffold_25_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4614..5408)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YYL6_CLOBU
Tyrosine recombinase {ECO:0000313|EMBL:KJZ86549.1}; Uncharacterized protein {ECO:0000313|EMBL:KJZ93660.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L3_131_244G1_scaffold_25_10
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5708..7012)
DNA (1305bp) protein (435aa)
MATE efflux family protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AYF6_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EMZ31468.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
MATE efflux family protein
L3_131_244G1_scaffold_25_11
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7418..8893)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C514_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72782.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L3_131_244G1_scaffold_25_12
RIFOXYB12_FULL_Sulfurimonas_35_9_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

9179..10210
DNA (1032bp) protein (344aa)
hisitdine kinase n=1 Tax=Geovibrio thiophilus RepID=UPI0003B43E3D
response regulator receiver modulated metal dependent phosphohydrolase
Tax=RIFOXYB12_FULL_Sulfurimonas_35_9_curated
L3_131_244G1_scaffold_25_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10194..12281
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HER8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96724.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Signal transduction histidine kinase
L3_131_244G1_scaffold_25_14
Cyanobacterium aponinum, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12315..12671
DNA (357bp) protein (119aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z8W5_CYAAP
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AFZ55040.1}; TaxID=755178 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium aponinum (strain PCC 10605).;"
L3_131_244G1_scaffold_25_15
alpha proteobacterium RS24, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12668..13447
DNA (780bp) protein (260aa)
4-hydroxy-3-methylbut-2-enyl-diphosphate synthase protein {ECO:0000313|EMBL:ERL47062.1}; EC=1.17.7.1 {ECO:0000313|EMBL:ERL47062.1};; TaxID=1397666 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium RS24.;"
4-hydroxy-3-methylbut-2-enyl-diphosphate synthase protein n=1 Tax=alpha proteobacterium RS24 RepID=U2XPJ1_9PROT
response regulator receiver modulated metal dependent phosphohydrolase
L3_131_244G1_scaffold_25_16
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13564..16347
DNA (2784bp) protein (928aa)
PTS system transcriptional activator n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PVA3_9CLOT
PTS system transcriptional activator {ECO:0000313|EMBL:EET86833.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
PTS system transcriptional activator
L3_131_244G1_scaffold_25_17
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16600..16905
DNA (306bp) protein (102aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DA33_9CLOT
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EEG51811.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L3_131_244G1_scaffold_25_18
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16931..18256
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G9U4_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
PTS system beta-glucoside-specific transporter subunit IIC
L3_131_244G1_scaffold_25_19
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

18290..18598
DNA (309bp) protein (103aa)
N%2CN'-diacetylchitobiose-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:CRH60493.1}; EC=2.7.1.- {ECO:0000313|EMBL:CRH60493.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
celC.2; PTS system cellobiose-specific transporter subunit IIA (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIA subunit n=2 Tax=Atopobium vaginae RepID=F1T5I7_9ACTN
L3_131_244G1_scaffold_25_20
Paenibacillus sp. FSL R7-0331, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18694..20898
DNA (2205bp) protein (735aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Enterococcus faecium PC4.1 RepID=D4VY36_ENTFC
glycosyl hydrolase family 3
Glycosyl hydrolase family 3 {ECO:0000313|EMBL:AIQ52107.1}; TaxID=1536773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0331.;"
L3_131_244G1_scaffold_25_21
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20915..22339
DNA (1425bp) protein (475aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G7R5_9FIRM
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EFW05836.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_131_244G1_scaffold_25_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22628..23182
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Y7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96978.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
accessory gene regulator B
L3_131_244G1_scaffold_25_23
unknown

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23205..23330
DNA (126bp) protein (42aa)

This feature has no annotations

L3_131_244G1_scaffold_25_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23352..24611
DNA (1260bp) protein (420aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q605_9CLOT
sensor histidine kinase
L3_131_244G1_scaffold_25_25
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24832..26094
DNA (1263bp) protein (421aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q605_9CLOT
sensor histidine kinase
L3_131_244G1_scaffold_25_26
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26379..26951
DNA (573bp) protein (191aa)
RNA polymerase factor sigma-70 (EC:2.7.7.6)
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Bacillus RepID=C3AK16_BACMY
Uncharacterized protein {ECO:0000313|EMBL:KEZ88457.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
L3_131_244G1_scaffold_25_27
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26944..28233
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CB83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26567.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L3_131_244G1_scaffold_25_28
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28411..28911
DNA (501bp) protein (167aa)
Sigma-70 region 2 n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y7F3_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:ESL03586.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
RNA polymerase sigma factor, sigma-70 family
L3_131_244G1_scaffold_25_29
unknown

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28931..30094
DNA (1164bp) protein (388aa)

This feature has no annotations

L3_131_244G1_scaffold_25_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30136..30984)
DNA (849bp) protein (283aa)
LD-carboxypeptidase family protein {ECO:0000313|EMBL:ACD24527.1}; Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:CDH91414.1}; EC=3.4.17.13 {ECO:0000313|EMBL:CDH91414.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
LD-carboxypeptidase family protein n=2 Tax=Clostridium botulinum B RepID=B2TN89_CLOBB
LD-carboxypeptidase family protein
Displaying items 1-30 of 171 in total

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