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L3_131_244G1_scaffold_37

Search features with annotation key words

Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_244G1_scaffold_37_1
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16..303)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JK44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQB24649.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
hypothetical protein
L3_131_244G1_scaffold_37_2
unknown

Not on your lists

comp(275..436)
DNA (162bp) protein (54aa)

This feature has no annotations

L3_131_244G1_scaffold_37_3
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(506..931)
DNA (426bp) protein (142aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IJE7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM57279.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
L3_131_244G1_scaffold_37_4
unknown

Not on your lists

comp(1085..1219)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_131_244G1_scaffold_37_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1297..2082)
DNA (786bp) protein (262aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKK6_9CLOT
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EKY28107.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_131_244G1_scaffold_37_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2092..2469)
DNA (378bp) protein (126aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJF3_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EKY28108.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
HipB; putative transcriptional regulator
L3_131_244G1_scaffold_37_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2777..3013)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28110.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_131_244G1_scaffold_37_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3016..3312)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28110.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_131_244G1_scaffold_37_9
Facklamia languida, Facklamia, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3856..4086
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Facklamia languida CCUG 37842 RepID=H3NJV9_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EHR36476.1}; TaxID=883113 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Facklamia.;" source="Facklamia languida CCUG 37842.;"
hypothetical protein
L3_131_244G1_scaffold_37_10
Facklamia languida, Facklamia, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4088..5695
DNA (1608bp) protein (536aa)
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
Putative uncharacterized protein n=1 Tax=Facklamia languida CCUG 37842 RepID=H3NJW0_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EHR36477.1}; TaxID=883113 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Facklamia.;" source="Facklamia languida CCUG 37842.;"
L3_131_244G1_scaffold_37_11
Streptococcus oralis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5661..6794
DNA (1134bp) protein (378aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Streptococcus oralis SK610 RepID=I0Q2Z9_STROR
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EIC75651.1}; TaxID=1095741 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus oralis SK610.;"
hypothetical protein
L3_131_244G1_scaffold_37_12
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6810..10241
DNA (3432bp) protein (1144aa)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EDM87775.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EDM87775.1};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
type I site-specific deoxyribonuclease, HsdR family (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRF7_9FIRM
L3_131_244G1_scaffold_37_13
unknown

Not on your lists

10242..10436
DNA (195bp) protein (65aa)

This feature has no annotations

L3_131_244G1_scaffold_37_14
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10874..11254)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T0E8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ52393.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L3_131_244G1_scaffold_37_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11282..11902)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T0E8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ52393.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L3_131_244G1_scaffold_37_16
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12289..13284
DNA (996bp) protein (332aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9Y5_CLOSV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM57628.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
L3_131_244G1_scaffold_37_17
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13679..14806)
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3ADD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84977.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
hypothetical protein
L3_131_244G1_scaffold_37_18
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14815..15795)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3ADE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84978.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
L3_131_244G1_scaffold_37_19
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15801..16481)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MB11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI96919.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
L3_131_244G1_scaffold_37_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16855..18210)
DNA (1356bp) protein (452aa)
23S rRNA-methyltransferase {ECO:0000313|EMBL:EEP55477.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEP55477.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
RNA methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Clostridium butyricum RepID=B1R1C0_CLOBU
L3_131_244G1_scaffold_37_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18488..18892)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0B7_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES50951.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_131_244G1_scaffold_37_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18912..19616)
DNA (705bp) protein (235aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0AG76_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84431.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_131_244G1_scaffold_37_23
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20154..20831)
DNA (678bp) protein (226aa)
Competence protein ComEA-like protein with helix-hairpin-helix repeat region n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAD7_9CLOT
Competence protein ComEA-like protein with helix-hairpin-helix repeat region {ECO:0000313|EMBL:EKQ55129.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
helix-hairpin-helix repeat-containing competence protein ComEA
L3_131_244G1_scaffold_37_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20990..22225
DNA (1236bp) protein (412aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T5Z8_9CLOT
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EKQ55128.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Serine-type D-Ala-D-Ala carboxypeptidase
L3_131_244G1_scaffold_37_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22281..23432)
DNA (1152bp) protein (384aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KJZ86365.1}; EC=1.2.1.11 {ECO:0000313|EMBL:KJZ86365.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Aspartate-semialdehyde dehydrogenase n=2 Tax=Clostridium butyricum RepID=M8KEX6_CLOBU
aspartate-semialdehyde dehydrogenase
L3_131_244G1_scaffold_37_26
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23497..24462
DNA (966bp) protein (322aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQS5_CLOB8
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABR32705.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_131_244G1_scaffold_37_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24652..25533)
DNA (882bp) protein (294aa)
ROK family protein n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W3N8_9FIRM
ROK family protein
Transcriptional regulator {ECO:0000313|EMBL:KJU72189.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_131_244G1_scaffold_37_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25547..26923)
DNA (1377bp) protein (459aa)
gmuD; 6-phospho-beta-glucosidase gmuD (EC:3.2.1.86)
6-phospho-beta-glucosidase gmuD {ECO:0000313|EMBL:AIY82684.1}; EC=3.2.1.86 {ECO:0000313|EMBL:AIY82684.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Glycosyl hydrolase, family 1 n=1 Tax=Candidatus Arthromitus sp. SFB-rat-Yit RepID=G2IE37_9CLOT
L3_131_244G1_scaffold_37_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26916..27731)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H214_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97125.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
SIS domain protein
L3_131_244G1_scaffold_37_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27756..30374)
DNA (2619bp) protein (873aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2W9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97124.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
Displaying items 1-30 of 133 in total

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