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L3_131_244G1_scaffold_41

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Displaying items 1-30 of 126 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_244G1_scaffold_41_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(406..1581)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UIB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQC66933.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
major facilitator superfamily protein
L3_131_244G1_scaffold_41_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1814..2707)
DNA (894bp) protein (298aa)
Protein-export membrane protein SecF n=4 Tax=Veillonella parvula RepID=D1BLM5_VEIPT
protein-export membrane protein SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
L3_131_244G1_scaffold_41_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2704..3978)
DNA (1275bp) protein (425aa)
Protein translocase subunit SecD n=3 Tax=Veillonella parvula RepID=T0T7B8_9FIRM
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
protein-export membrane protein SecD
L3_131_244G1_scaffold_41_4
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3997..4563)
DNA (567bp) protein (189aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KLS0_9FIRM
5-formyltetrahydrofolate cyclo-ligase
L3_131_244G1_scaffold_41_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4563..4853)
DNA (291bp) protein (97aa)
Preprotein translocase, YajC subunit n=6 Tax=Veillonella RepID=D1BLM2_VEIPT
preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EGL76670.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L3_131_244G1_scaffold_41_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4931..6046)
DNA (1116bp) protein (372aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Queuine tRNA-ribosyltransferase n=3 Tax=Veillonella RepID=D1YQU6_9FIRM
queuine tRNA-ribosyltransferase
L3_131_244G1_scaffold_41_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6055..7080)
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
UPI0003D5BEF1 related cluster n=1 Tax=unknown RepID=UPI0003D5BEF1
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
L3_131_244G1_scaffold_41_8
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7092..8879)
DNA (1788bp) protein (596aa)
UPI0003D59AF6 related cluster n=1 Tax=unknown RepID=UPI0003D59AF6
SpoIID/LytB protein {ECO:0000313|EMBL:ETI99055.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
SpoIID/LytB domain-containing protein
L3_131_244G1_scaffold_41_9
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8882..9886)
DNA (1005bp) protein (335aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Holliday junction ATP-dependent DNA helicase RuvB n=3 Tax=Veillonella parvula RepID=T0T055_9FIRM
Holliday junction DNA helicase RuvB
L3_131_244G1_scaffold_41_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9889..10497)
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L229_9FIRM
Holliday junction DNA helicase RuvA
L3_131_244G1_scaffold_41_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10497..10991)
DNA (495bp) protein (165aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Crossover junction endodeoxyribonuclease RuvC n=6 Tax=Veillonella RepID=D1BLL6_VEIPT
crossover junction endodeoxyribonuclease RuvC
L3_131_244G1_scaffold_41_12
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11195..11932)
DNA (738bp) protein (246aa)
Probable transcriptional regulatory protein HMPREF1035_1153 n=2 Tax=Veillonella RepID=D1YQU0_9FIRM
Probable transcriptional regulatory protein HMPREF0874_01785 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
hypothetical protein
L3_131_244G1_scaffold_41_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11942..12514)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB85686.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
hypothetical protein
L3_131_244G1_scaffold_41_14
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12573..13133)
DNA (561bp) protein (187aa)
UPI0003D5EAEB related cluster n=1 Tax=unknown RepID=UPI0003D5EAEB
Uncharacterized protein {ECO:0000313|EMBL:ETI99061.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L3_131_244G1_scaffold_41_15
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13145..13576)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UAK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI99062.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L3_131_244G1_scaffold_41_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13593..14681)
DNA (1089bp) protein (363aa)
UPI0003D66E09 related cluster n=1 Tax=unknown RepID=UPI0003D66E09
Uncharacterized protein {ECO:0000313|EMBL:ETI99063.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L3_131_244G1_scaffold_41_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14760..16067)
DNA (1308bp) protein (436aa)
Putative Glutathionylspermidine synthase, group 2 {ECO:0000313|EMBL:EQC66917.1}; EC=6.3.1.8 {ECO:0000313|EMBL:EQC66917.1};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Putative Glutathionylspermidine synthase, group 2 n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T780_9FIRM
glutathionylspermidine synthase
L3_131_244G1_scaffold_41_18
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16082..16654)
DNA (573bp) protein (191aa)
UPI0003D6520D related cluster n=1 Tax=unknown RepID=UPI0003D6520D
Uncharacterized protein {ECO:0000313|EMBL:ETI99065.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L3_131_244G1_scaffold_41_19
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16699..17745)
DNA (1047bp) protein (349aa)
UPI0003D6062F related cluster n=1 Tax=unknown RepID=UPI0003D6062F
Uncharacterized protein {ECO:0000313|EMBL:ETI99066.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L3_131_244G1_scaffold_41_20
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17742..18557)
DNA (816bp) protein (272aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UAJ6_9FIRM
tRNA (guanine-N1)-methyltransferase
L3_131_244G1_scaffold_41_21
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18678..19175)
DNA (498bp) protein (166aa)
UPI0003D5AF54 related cluster n=1 Tax=unknown RepID=UPI0003D5AF54
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
16S rRNA processing protein RimM
L3_131_244G1_scaffold_41_22
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19175..19582)
DNA (408bp) protein (136aa)
Uncharacterized protein n=3 Tax=Veillonella parvula RepID=D1BLK5_VEIPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETI99069.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L3_131_244G1_scaffold_41_23
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19597..19824)
DNA (228bp) protein (76aa)
UPF0109 protein Vpar_0578 n=11 Tax=Veillonella RepID=D1BLK4_VEIPT
RNA-binding protein
UPF0109 protein HMPREF0870_01203 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
L3_131_244G1_scaffold_41_24
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19846..20109)
DNA (264bp) protein (88aa)
30S ribosomal protein S16 n=10 Tax=Veillonella RepID=D1BLK3_VEIPT
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
L3_131_244G1_scaffold_41_25
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(20170..21522)
DNA (1353bp) protein (451aa)
UPI0003D677DE related cluster n=1 Tax=unknown RepID=UPI0003D677DE
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
signal recognition particle protein
L3_131_244G1_scaffold_41_26
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21512..21847)
DNA (336bp) protein (112aa)
UPF0122 protein HSIVP1_1951 n=4 Tax=Veillonella RepID=T0T770_9FIRM
UPF0122 protein Q619_VDC00514G0021 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
helix-turn-helix protein YlxM/p13 family protein
L3_131_244G1_scaffold_41_27
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22155..23480
DNA (1326bp) protein (442aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KS77_9FIRM
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:EFG24122.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
pyridine nucleotide-disulfide oxidoreductase dimerisation subunit
L3_131_244G1_scaffold_41_28
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23678..24205)
DNA (528bp) protein (176aa)
Membrane spanning protein n=2 Tax=Veillonella parvula HSIVP1 RepID=T0T043_9FIRM
Membrane spanning protein {ECO:0000313|EMBL:EQC66905.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
hypothetical protein
L3_131_244G1_scaffold_41_29
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24426..26600)
DNA (2175bp) protein (725aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EGL76630.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EGL76630.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Copper-exporting ATPase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L248_9FIRM
copper-translocating P-type ATPase
L3_131_244G1_scaffold_41_30
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27008..27661
DNA (654bp) protein (218aa)
Protein co-occurring with transport system n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UI88_9FIRM
YigZ family protein {ECO:0000313|EMBL:EGL76675.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
hypothetical protein
Displaying items 1-30 of 126 in total

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