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L3_131_368G1_scaffold_3967

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_3967_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..141)
DNA (141bp) protein (47aa)
Putative antirepressor n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE81_9FIRM
Putative antirepressor {ECO:0000313|EMBL:CDD76386.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Prophage antirepressor
L3_131_368G1_scaffold_3967_2
unknown

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253..1077
DNA (825bp) protein (275aa)

This feature has no annotations

L3_131_368G1_scaffold_3967_3
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1144..1344)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000374C417
Helix-turn-helix domain {ECO:0000313|EMBL:EXG84121.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
putative Xre family DNA-binding protein
L3_131_368G1_scaffold_3967_4
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1544..1996
DNA (453bp) protein (151aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPP4_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM88840.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Helix-turn-helix.
L3_131_368G1_scaffold_3967_5
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2006..2437
DNA (432bp) protein (144aa)
Predicted Zn peptidase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G2W7_9CLOT
Predicted Zn peptidase {ECO:0000313|EMBL:CCY11645.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Predicted Zn peptidase
L3_131_368G1_scaffold_3967_6
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2464..3000
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JKL2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63418.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L3_131_368G1_scaffold_3967_7
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3157..4416
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L9W5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET62372.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Phage integrase family.
L3_131_368G1_scaffold_3967_8
unknown

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comp(4300..4659)
DNA (360bp) protein (120aa)

This feature has no annotations

Displaying 8 items

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