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L3_131_368G1_scaffold_2172

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_2172_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..726)
DNA (726bp) protein (242aa)
Virulence-associated protein E n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTU0_9CLOT
Virulence-associated protein E {ECO:0000313|EMBL:EEA80543.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
virulence-associated protein e
L3_131_368G1_scaffold_2172_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1005..1193)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22510.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_131_368G1_scaffold_2172_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1190..1345)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80546.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_131_368G1_scaffold_2172_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1389..1583)
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22509.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_131_368G1_scaffold_2172_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1727..2218
DNA (492bp) protein (164aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTU5_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEA80548.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
helix-turn-helix family protein
L3_131_368G1_scaffold_2172_6
unknown

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comp(2140..2334)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_131_368G1_scaffold_2172_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2835..3878
DNA (1044bp) protein (348aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTU6_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEA80549.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
phage integrase
L3_131_368G1_scaffold_2172_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4006..4500
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80550.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted membrane protein
L3_131_368G1_scaffold_2172_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4636..6210
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80552.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_131_368G1_scaffold_2172_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6231..8735)
DNA (2505bp) protein (835aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QN35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23372.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_131_368G1_scaffold_2172_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8786..9550)
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23373.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_131_368G1_scaffold_2172_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9581..9886)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23373.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_131_368G1_scaffold_2172_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10015..11568)
DNA (1554bp) protein (518aa)
Histidine kinase A domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTV2_9CLOT
Histidine kinase A domain protein {ECO:0000313|EMBL:EEA80555.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Signal transduction histidine kinase
L3_131_368G1_scaffold_2172_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11528..12424)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PRI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23374.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_131_368G1_scaffold_2172_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12437..13132)
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=B6FTV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23375.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_131_368G1_scaffold_2172_16
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13256..14050)
DNA (795bp) protein (265aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD91_9FIRM
L3_131_368G1_scaffold_2172_17
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14071..16443)
DNA (2373bp) protein (791aa)
Pyruvate-formate lyase (EC:2.3.1.54)
Pyruvate formate-lyase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD88_9FIRM
Pyruvate formate-lyase {ECO:0000313|EMBL:EGG80872.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_131_368G1_scaffold_2172_18
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16448..17359)
DNA (912bp) protein (304aa)
Glycyl-radical enzyme activating protein family n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD87_9FIRM
Glycyl-radical enzyme activating protein family {ECO:0000313|EMBL:EGG80871.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
glycyl-radical enzyme activating family protein
L3_131_368G1_scaffold_2172_19
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17537..18109
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80870.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
DNA-binding protein
L3_131_368G1_scaffold_2172_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18608..20017)
DNA (1410bp) protein (470aa)
Sucrose phosphorylase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K4H6_9FIRM
Sucrose phosphorylase {ECO:0000313|EMBL:ERJ87162.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
sugar phosphorylase
L3_131_368G1_scaffold_2172_21
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20022..21194)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6KTP6_9FIRM
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:KFN05723.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
Predicted dehydrogenases and related proteins
Displaying 21 items

View Taxonomy