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L3_131_368G1_scaffold_2206

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_2206_1
unknown

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comp(807..1052)
DNA (246bp) protein (82aa)

This feature has no annotations

L3_131_368G1_scaffold_2206_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1049..1792)
DNA (744bp) protein (248aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IL11_9CLOT
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_131_368G1_scaffold_2206_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1794..2828)
DNA (1035bp) protein (345aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J132_9CLOT
L3_131_368G1_scaffold_2206_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2834..3745)
DNA (912bp) protein (304aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=10 Tax=Clostridium RepID=N9ZYI0_9CLOT
L3_131_368G1_scaffold_2206_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3949..4419)
DNA (471bp) protein (157aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8S353_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13257.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_131_368G1_scaffold_2206_6
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4438..4887)
DNA (450bp) protein (150aa)
Ribosomal-protein-alanine acetyltransferase n=10 Tax=Clostridium RepID=G5I7P5_9CLOT
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CDB62289.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
ribosomal-protein-alanine acetyltransferase
L3_131_368G1_scaffold_2206_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4913..5674)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1B9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42727.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L3_131_368G1_scaffold_2206_8
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5671..6099)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRJ9_9CLOT
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE {ECO:0000313|EMBL:KJJ75193.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
conserved hypothetical nucleotide-binding protein
L3_131_368G1_scaffold_2206_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6089..8245)
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42725.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Tex-like protein
L3_131_368G1_scaffold_2206_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9076..10251)
DNA (1176bp) protein (392aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=4 Tax=Clostridium RepID=N9YPD7_9CLOT
L3_131_368G1_scaffold_2206_11
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10337..10780)
DNA (444bp) protein (148aa)
UPF0735 ACT domain-containing protein CLOSTASPAR_00928 n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVC5_9CLOT
UPF0735 ACT domain-containing protein CLOSTASPAR_00928 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
amino acid-binding ACT protein
L3_131_368G1_scaffold_2206_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11026..12042)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IFE3_9CLOT
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_131_368G1_scaffold_2206_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12212..14782)
DNA (2571bp) protein (857aa)
Protein translocase subunit SecA n=3 Tax=Clostridium bolteae RepID=A8S364_9CLOT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Preprotein translocase subunit SecA
L3_131_368G1_scaffold_2206_14
unknown

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comp(15208..15414)
DNA (207bp) protein (69aa)

This feature has no annotations

L3_131_368G1_scaffold_2206_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15694..16233
DNA (540bp) protein (180aa)
Ribosomal subunit interface protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVD1_9CLOT
Ribosomal subunit interface protein {ECO:0000313|EMBL:EEG56976.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ribosomal subunit interface protein
L3_131_368G1_scaffold_2206_16
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16755..17582)
DNA (828bp) protein (276aa)
Integrase family protein n=2 Tax=Clostridiales RepID=G2T0J4_ROSHA
integrase family protein
Uncharacterized protein {ECO:0000313|EMBL:EOS56352.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Displaying 16 items

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