ggKbase home page

L3_131_368G1_scaffold_2700

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_2700_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..2274
DNA (2274bp) protein (758aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase, large subunit n=2 Tax=Clostridium RepID=B6FU07_9CLOT
L3_131_368G1_scaffold_2700_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2459..6574
DNA (4116bp) protein (1372aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU06_9CLOT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EEA80500.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
metallophosphoesterase
L3_131_368G1_scaffold_2700_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6731..7594
DNA (864bp) protein (288aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Orn/Lys/Arg decarboxylase, major domain protein n=2 Tax=Clostridium RepID=B6FU05_9CLOT
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EEA80499.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_131_368G1_scaffold_2700_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7560..8081
DNA (522bp) protein (174aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Orn/Lys/Arg decarboxylase, major domain protein n=2 Tax=Clostridium RepID=B6FU05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23420.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_131_368G1_scaffold_2700_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8074..8553
DNA (480bp) protein (160aa)
Guanylate kinase (EC:2.7.4.8)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FU04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80498.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_131_368G1_scaffold_2700_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8623..9576
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23418.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_131_368G1_scaffold_2700_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9580..10491
DNA (912bp) protein (304aa)
PSP1 C-terminal domain protein n=2 Tax=Clostridium RepID=B6FU02_9CLOT
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EEA80496.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Uncharacterized homolog of PSP1
L3_131_368G1_scaffold_2700_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10481..11221
DNA (741bp) protein (247aa)
Methyltransferase domain protein n=2 Tax=Clostridium RepID=B6FU01_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EEA80495.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_131_368G1_scaffold_2700_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11237..11770
DNA (534bp) protein (178aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU00_9CLOT
conserved hypothetical protein TIGR00096
Displaying 9 items

View Taxonomy