ggKbase home page

L3_131_368G1_scaffold_23

Search features with annotation key words

Displaying items 1-30 of 308 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_23_1
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..346
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BMK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI73043.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_131_368G1_scaffold_23_2
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

702..2180
DNA (1479bp) protein (493aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CB73_9CLOT
L3_131_368G1_scaffold_23_3
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2192..4432
DNA (2241bp) protein (747aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Primosomal protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B417_9CLOT
priA; primosomal protein N' PriA
L3_131_368G1_scaffold_23_4
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4465..4938
DNA (474bp) protein (158aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AL06_9CLOT
L3_131_368G1_scaffold_23_5
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5039..5971
DNA (933bp) protein (311aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B2T4_9CLOT
L3_131_368G1_scaffold_23_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5965..6669
DNA (705bp) protein (235aa)
Putative neutral zinc metallopeptidase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CGQ0_9CLOT
Putative neutral zinc metallopeptidase {ECO:0000313|EMBL:ERI66531.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Predicted Zn-dependent protease
L3_131_368G1_scaffold_23_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6774..8147
DNA (1374bp) protein (458aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
sun; rRNA small subunit methyltransferase B Sun (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CB79_9CLOT
L3_131_368G1_scaffold_23_8
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8230..9285
DNA (1056bp) protein (352aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B419_9CLOT
L3_131_368G1_scaffold_23_9
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9286..10011
DNA (726bp) protein (242aa)
Putative serine/threonine phosphatase stp n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AL13_9CLOT
Putative serine/threonine phosphatase stp {ECO:0000313|EMBL:ERI66534.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Ser/Thr protein phosphatase
L3_131_368G1_scaffold_23_10
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10123..12246
DNA (2124bp) protein (708aa)
Kinase domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B2T9_9CLOT
Kinase domain protein {ECO:0000313|EMBL:ERI66535.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
SPS1; serine/threonine protein kinase
L3_131_368G1_scaffold_23_11
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12251..13126
DNA (876bp) protein (292aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CGQ5_9CLOT
GTPase
L3_131_368G1_scaffold_23_12
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13864..14961
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AL18_9CLOT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
GTP-binding protein YchF
L3_131_368G1_scaffold_23_13
unknown

Not on your lists

comp(14851..15348)
DNA (498bp) protein (166aa)

This feature has no annotations

L3_131_368G1_scaffold_23_14
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15510..16172)
DNA (663bp) protein (221aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CB89_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI66542.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ABC transporter ATP-binding protein
L3_131_368G1_scaffold_23_15
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16730..17167
DNA (438bp) protein (146aa)
Protein MraZ n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B2V0_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
MraZ protein
L3_131_368G1_scaffold_23_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17186..18121
DNA (936bp) protein (312aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CGR4_9CLOT
mraW; S-adenosyl-methyltransferase MraW
L3_131_368G1_scaffold_23_17
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18178..18681
DNA (504bp) protein (168aa)
Septum formation initiator n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CB95_9CLOT
Septum formation initiator {ECO:0000313|EMBL:ERI66547.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_131_368G1_scaffold_23_18
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18742..21045
DNA (2304bp) protein (768aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B434_9CLOT
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:ERI66548.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ftsI; cell division protein FtsI
L3_131_368G1_scaffold_23_19
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21205..22959
DNA (1755bp) protein (585aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AL30_9CLOT
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:ERI66549.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_131_368G1_scaffold_23_20
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22997..23953
DNA (957bp) protein (319aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CGR9_9CLOT
L3_131_368G1_scaffold_23_21
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24220..25581
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B439_9CLOT
UDP-N-acetylmuramoylalanine-D-glutamate ligase
L3_131_368G1_scaffold_23_22
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25586..26740
DNA (1155bp) protein (385aa)
Putative cell division protein FtsW n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AL37_9CLOT
Putative cell division protein FtsW {ECO:0000313|EMBL:ERI66554.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ftsW; cell division protein FtsW
L3_131_368G1_scaffold_23_23
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27014..28267
DNA (1254bp) protein (418aa)
Putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Fragment) n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B2V9_9CLOT
Putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000313|EMBL:ERI66555.1}; Flags: Fragment;; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L3_131_368G1_scaffold_23_24
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28373..29551
DNA (1179bp) protein (393aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CAF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66217.1}; Flags: Fragment;; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ftsQ; cell division protein FtsQ
L3_131_368G1_scaffold_23_25
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29648..30838
DNA (1191bp) protein (397aa)
Cell division protein FtsZ n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B398_9CLOT
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ftsZ; cell division protein FtsZ
L3_131_368G1_scaffold_23_26
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31391..32239
DNA (849bp) protein (283aa)
Sigma-E processing peptidase SpoIIGA n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CFX1_9CLOT
Sigma-E processing peptidase SpoIIGA {ECO:0000313|EMBL:ERI66221.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
peptidase U4 sporulation factor SpoIIGA
L3_131_368G1_scaffold_23_27
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32199..32936
DNA (738bp) protein (246aa)
RNA polymerase sigma factor n=2 Tax=Clostridiales RepID=F7K8I6_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sporulation sigma factor SigE
L3_131_368G1_scaffold_23_28
unknown

Not on your lists

comp(32793..33395)
DNA (603bp) protein (201aa)

This feature has no annotations

L3_131_368G1_scaffold_23_29
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33442..33783)
DNA (342bp) protein (114aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B212_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66225.1}; Flags: Fragment;; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_131_368G1_scaffold_23_30
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33952..34731
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CBT5_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
RNA polymerase, sigma subunit, RpsG/SigG
Displaying items 1-30 of 308 in total

View Taxonomy