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L3_131_368G1_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 155 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_32_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81..260)
DNA (180bp) protein (60aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=C6JA84_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CBL08599.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_368G1_scaffold_32_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(514..3141)
DNA (2628bp) protein (876aa)
ppdK; Pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T3A9_9FIRM
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CDC66680.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_131_368G1_scaffold_32_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3912..5138)
DNA (1227bp) protein (409aa)
Putative 23S rRNA m5C1962 methyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFL6_9FIRM
Putative 23S rRNA m5C1962 methyltransferase {ECO:0000313|EMBL:CDC66681.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_131_368G1_scaffold_32_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5395..6114)
DNA (720bp) protein (240aa)
Peptidase M23 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U799_9FIRM
Peptidase M23 {ECO:0000313|EMBL:CDC66682.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_131_368G1_scaffold_32_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6334..7347)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZR1_9FIRM
HTH-type transcriptional regulator
HTH-type transcriptional regulator {ECO:0000313|EMBL:CCO04197.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_32_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8330..9352)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CQC8_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04196.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_32_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9480..10718)
DNA (1239bp) protein (413aa)
Transglutaminase domain-containing protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0X8_9FIRM
Transglutaminase domain-containing protein {ECO:0000313|EMBL:CDC65885.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_131_368G1_scaffold_32_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10782..12140)
DNA (1359bp) protein (453aa)
CBS domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T820_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04194.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_32_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12338..12829)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U4Y2_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC65882.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_131_368G1_scaffold_32_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12846..13349)
DNA (504bp) protein (168aa)
coaD; pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0X2_9FIRM
L3_131_368G1_scaffold_32_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13349..13903)
DNA (555bp) protein (185aa)
Methyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SXF7_9FIRM
Putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:CCO04191.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_32_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14080..14958)
DNA (879bp) protein (293aa)
Putative lipoprotein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDD0_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04190.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_32_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15154..15918)
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T810_9FIRM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDC65874.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Short chain dehydrogenase
L3_131_368G1_scaffold_32_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16167..17075
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U4X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65872.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_131_368G1_scaffold_32_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17289..18152
DNA (864bp) protein (288aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0W2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04187.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_32_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18170..18685
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SXE3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04186.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_32_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18699..20114
DNA (1416bp) protein (472aa)
Putative alginate O-acetyltransferase AlgI n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDB9_9FIRM
Putative alginate O-acetyltransferase
Putative alginate O-acetyltransferase {ECO:0000313|EMBL:CCO04185.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_32_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20130..21263
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T802_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04184.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_32_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21344..21772
DNA (429bp) protein (143aa)
Acyl-CoA thioester hydrolase YbgC/YbaW family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U4W0_9FIRM
Acyl-CoA thioester hydrolase YbgC/YbaW family {ECO:0000313|EMBL:CDC65862.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_131_368G1_scaffold_32_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21847..22278)
DNA (432bp) protein (144aa)
Iron-sulfur binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T7Z8_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04182.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_32_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22259..22834)
DNA (576bp) protein (192aa)
BioY family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SXD0_9FIRM
BioY family protein {ECO:0000313|EMBL:CDC65858.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
unnamed protein product
L3_131_368G1_scaffold_32_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23479..24777
DNA (1299bp) protein (433aa)
metY; O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U4A6_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:CDC65642.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_131_368G1_scaffold_32_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24981..25418)
DNA (438bp) protein (146aa)
rpiB; K01808 ribose 5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T7D6_9FIRM
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:CDC65644.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_131_368G1_scaffold_32_24
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25431..26129)
DNA (699bp) protein (233aa)
Peptidase M22 glycoprotease n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCR0_9FIRM
Peptidase M22 glycoprotease {ECO:0000313|EMBL:CDC65646.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_131_368G1_scaffold_32_25
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26101..26556)
DNA (456bp) protein (152aa)
Uncharacterized protein family UPF0079 ATPase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SWT3_9FIRM
Uncharacterized protein family UPF0079 ATPase {ECO:0000313|EMBL:CDC65648.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_131_368G1_scaffold_32_26
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26561..27358)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0A0_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CDC65650.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_131_368G1_scaffold_32_27
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27358..28536)
DNA (1179bp) protein (393aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U4B7_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC65652.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_131_368G1_scaffold_32_28
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28840..30510)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
fhs; Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T7E6_9FIRM
L3_131_368G1_scaffold_32_29
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30717..32177)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65656.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_131_368G1_scaffold_32_30
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32233..32952)
DNA (720bp) protein (240aa)
Tim44-like domain n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SWU3_9FIRM
Tim44-like domain {ECO:0000313|EMBL:CDC65658.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
Displaying items 1-30 of 155 in total

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