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L3_131_368G1_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_65_1
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(682..1797)
DNA (1116bp) protein (372aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
DNA polymerase III subunit beta n=1 Tax=Clostridium sp. CAG:343 RepID=R6NE97_9CLOT
DNA polymerase III subunit beta
L3_131_368G1_scaffold_65_2
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2120..3478)
DNA (1359bp) protein (453aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Clostridium sp. CAG:343 RepID=R6N6H8_9CLOT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
chromosomal replication initiator protein DnaA
L3_131_368G1_scaffold_65_3
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4061..4195
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Clostridium sp. CAG:575 RepID=R6I344_9CLOT
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
50S ribosomal protein L34
L3_131_368G1_scaffold_65_4
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4300..4662
DNA (363bp) protein (121aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
Ribonuclease P protein component n=1 Tax=Clostridium sp. CAG:343 RepID=R6P9X9_9CLOT
ribonuclease P protein component
L3_131_368G1_scaffold_65_5
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4647..4865
DNA (219bp) protein (73aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Clostridium sp. CAG:470 RepID=R7FF64_9CLOT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
hypothetical protein
L3_131_368G1_scaffold_65_6
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4883..5779
DNA (897bp) protein (299aa)
Membrane protein insertase YidC/Oxa1 family n=1 Tax=Clostridium sp. CAG:343 RepID=R6NEA0_9CLOT
Membrane protein insertase YidC/Oxa1 family {ECO:0000313|EMBL:CDC06699.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
YidC/Oxa1 family membrane protein insertase
L3_131_368G1_scaffold_65_7
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5784..6470
DNA (687bp) protein (229aa)
Conserved protein JAG-family n=1 Tax=Clostridium sp. CAG:343 RepID=R6N6I3_9CLOT
Conserved protein JAG-family {ECO:0000313|EMBL:CDC06700.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
jag protein
L3_131_368G1_scaffold_65_8
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6944..8254
DNA (1311bp) protein (437aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
tRNA modification GTPase MnmE n=1 Tax=Clostridium sp. CAG:343 RepID=R6NKE2_9CLOT
tRNA modification GTPase trmE
L3_131_368G1_scaffold_65_9
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8679..10556
DNA (1878bp) protein (626aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Clostridium sp. CAG:343 RepID=R6P9Y4_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
L3_131_368G1_scaffold_65_10
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10708..11430
DNA (723bp) protein (241aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium sp. CAG:389 RepID=R7LRC2_9CLOT
L3_131_368G1_scaffold_65_11
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12016..12801
DNA (786bp) protein (262aa)
ATPase involved in chromosome partitioning n=1 Tax=Clostridium sp. CAG:343 RepID=R6NEA3_9CLOT
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:CDC06704.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
cobyrinic acid ac-diamide synthase
L3_131_368G1_scaffold_65_12
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12836..13675
DNA (840bp) protein (280aa)
ParB-like protein partition protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N6I7_9CLOT
ParB-like protein partition protein {ECO:0000313|EMBL:CDC06705.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
parB-like partition protein
L3_131_368G1_scaffold_65_13
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13710..14225
DNA (516bp) protein (172aa)
Conserved protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FH11_9CLOT
Conserved protein {ECO:0000313|EMBL:CDE13951.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
hypothetical protein
L3_131_368G1_scaffold_65_14
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14197..15699
DNA (1503bp) protein (501aa)
PMT family glycosyltransferase 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Clostridium sp. CAG:470 RepID=R7FGF8_9CLOT
PMT family glycosyltransferase 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:CDE13950.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
L3_131_368G1_scaffold_65_15
unknown

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15824..16036
DNA (213bp) protein (71aa)

This feature has no annotations

L3_131_368G1_scaffold_65_16
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16627..16923
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6BZM3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA58547.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hypothetical protein
L3_131_368G1_scaffold_65_17
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16923..17567
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B2T7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA58548.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hypothetical protein
L3_131_368G1_scaffold_65_18
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18187..18387)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XK80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12809.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
L3_131_368G1_scaffold_65_19
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19528..20460
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GGF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE26061.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L3_131_368G1_scaffold_65_20
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20472..20897
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GGX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE26058.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L3_131_368G1_scaffold_65_21
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21091..21444
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GJ86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE26057.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L3_131_368G1_scaffold_65_22
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21720..22085
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GGE8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE26056.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L3_131_368G1_scaffold_65_23
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22078..23304
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GFY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE26055.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
hypothetical protein
L3_131_368G1_scaffold_65_24
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23249..25216
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GF72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE26054.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
Type IV secretory pathway VirB4 components-like protein
L3_131_368G1_scaffold_65_25
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25356..27866
DNA (2511bp) protein (837aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GGX2_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDE26053.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L3_131_368G1_scaffold_65_26
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27887..28837
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GJ80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE26052.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L3_131_368G1_scaffold_65_27
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28857..32381
DNA (3525bp) protein (1175aa)
Putative hydrolase n=1 Tax=Clostridium sp. CAG:575 RepID=R6HE75_9CLOT
Putative hydrolase {ECO:0000313|EMBL:CDB32254.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
peptidase M23B
L3_131_368G1_scaffold_65_28
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32323..33708
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:575 RepID=R6H3C8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB32253.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
L3_131_368G1_scaffold_65_29
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33776..34456)
DNA (681bp) protein (227aa)
Chaperone protein DnaJ n=1 Tax=Clostridium sp. CAG:440 RepID=R7GJ75_9CLOT
Chaperone protein DnaJ {ECO:0000313|EMBL:CDE26047.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
Heat shock protein
L3_131_368G1_scaffold_65_30
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34603..38922)
DNA (4320bp) protein (1440aa)
CoA-substrate-specific enzyme activase n=1 Tax=Clostridium sp. CAG:343 RepID=R6N6K3_9CLOT
CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:CDC06725.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
Displaying items 1-30 of 118 in total

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