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L3_131_368G1_scaffold_74

Search features with annotation key words

Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_74_1
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

251..610
DNA (360bp) protein (120aa)
Ribosome-binding factor A n=1 Tax=Clostridium sp. CAG:575 RepID=R6HE13_9CLOT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
ribosome-binding factor A
L3_131_368G1_scaffold_74_2
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

724..1701
DNA (978bp) protein (326aa)
Exopolyphosphatase-like enzyme n=1 Tax=Clostridium sp. CAG:389 RepID=R7LRF2_9CLOT
Exopolyphosphatase-like enzyme {ECO:0000313|EMBL:CDE90666.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
exopolyphosphatase-like protein
L3_131_368G1_scaffold_74_3
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1808..2671
DNA (864bp) protein (288aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
tRNA pseudouridine synthase B n=1 Tax=Clostridium sp. CAG:389 RepID=R7LTI5_9CLOT
tRNA pseudouridine synthase B
L3_131_368G1_scaffold_74_4
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2739..2945)
DNA (207bp) protein (69aa)
Methyltransferase type 12 n=1 Tax=Clostridium sp. CAG:440 RepID=R7GG16_9CLOT
Methyltransferase type 12 {ECO:0000313|EMBL:CDE24902.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L3_131_368G1_scaffold_74_5
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2911..3327)
DNA (417bp) protein (139aa)
SAM-dependent methyltransferase n=1 Tax=Vibrio campbellii HY01 RepID=A6ALJ8_9VIBR
SAM-dependent methyltransferase {ECO:0000313|EMBL:EDL70337.1}; TaxID=410291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii (strain HY01).;"
dimethyladenosine transferase
L3_131_368G1_scaffold_74_6
unknown

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comp(3428..3748)
DNA (321bp) protein (107aa)

This feature has no annotations

L3_131_368G1_scaffold_74_7
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3929..4768
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6PAF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06872.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_131_368G1_scaffold_74_8
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4856..7480
DNA (2625bp) protein (875aa)
Penicillin-binding protein 1A family n=1 Tax=Clostridium sp. CAG:343 RepID=R6NKV9_9CLOT
Penicillin-binding protein 1A family {ECO:0000313|EMBL:CDC06871.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
penicillin-binding protein
L3_131_368G1_scaffold_74_9
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7648..9042
DNA (1395bp) protein (465aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
Cysteine--tRNA ligase n=1 Tax=Clostridium sp. CAG:575 RepID=R6HE07_9CLOT
cysteinyl-tRNA synthetase
L3_131_368G1_scaffold_74_10
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9154..10155
DNA (1002bp) protein (334aa)
UDP-glucose 4-epimerase n=1 Tax=Clostridium sp. CAG:575 RepID=R6H4R2_9CLOT
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDB31765.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
UDP-galactose 4-epimerase
L3_131_368G1_scaffold_74_11
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10323..10718)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LTJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE90677.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
hypothetical protein
L3_131_368G1_scaffold_74_12
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10725..11735)
DNA (1011bp) protein (337aa)
Stage V sporulation protein AD n=1 Tax=Clostridium sp. CAG:343 RepID=R6P949_9CLOT
Stage V sporulation protein AD {ECO:0000313|EMBL:CDC06422.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
stage V sporulation protein AD
L3_131_368G1_scaffold_74_13
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11811..12278)
DNA (468bp) protein (156aa)
Stage V sporulation protein AC n=1 Tax=Clostridium sp. CAG:575 RepID=R6I289_9CLOT
Stage V sporulation protein AC {ECO:0000313|EMBL:CDB32207.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
stage V sporulation protein AC
L3_131_368G1_scaffold_74_14
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12302..12529)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NDM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06424.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L3_131_368G1_scaffold_74_15
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12656..13993
DNA (1338bp) protein (446aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
Sun protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LPS4_9CLOT
ribosomal RNA small subunit methyltransferase RsmB/transcription antitermination factor NusB
L3_131_368G1_scaffold_74_16
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14174..15826
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NJK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06426.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_131_368G1_scaffold_74_17
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15823..16539
DNA (717bp) protein (239aa)
atpD; ATP synthase F1, beta subunit (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GER2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE25506.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L3_131_368G1_scaffold_74_18
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16562..16987
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GHQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE25507.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L3_131_368G1_scaffold_74_19
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17072..17536
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GIJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE25777.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L3_131_368G1_scaffold_74_20
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17617..18069
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GIJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE25777.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L3_131_368G1_scaffold_74_21
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18179..18994
DNA (816bp) protein (272aa)
Prepilin peptidase (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5V3_9CLOT
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000313|EMBL:CDC06430.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_131_368G1_scaffold_74_22
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19010..19414
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:575 RepID=R6H613_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB32215.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
L3_131_368G1_scaffold_74_23
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19416..19862
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GER9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE25511.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L3_131_368G1_scaffold_74_24
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19949..21580
DNA (1632bp) protein (544aa)
Type II secretion system protein E n=1 Tax=Clostridium sp. CAG:440 RepID=R7GHQ8_9CLOT
Type II secretion system protein E {ECO:0000313|EMBL:CDE25512.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
type II secretion system protein E
L3_131_368G1_scaffold_74_25
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21610..22713
DNA (1104bp) protein (368aa)
Twitching motility protein n=1 Tax=Clostridium sp. CAG:575 RepID=R6H3A0_9CLOT
Twitching motility protein {ECO:0000313|EMBL:CDB32218.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
pilus retraction protein PilT
L3_131_368G1_scaffold_74_26
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22737..24092
DNA (1356bp) protein (452aa)
Type II secretion system F domain n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5V8_9CLOT
Type II secretion system F domain {ECO:0000313|EMBL:CDC06435.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
type II secretion system F domain-containing protein
L3_131_368G1_scaffold_74_27
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24368..25273
DNA (906bp) protein (302aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:575 RepID=R6H616_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDB32220.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
NagC4; transcriptional regulator
L3_131_368G1_scaffold_74_28
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25354..26286
DNA (933bp) protein (311aa)
Transketolase C-terminal section n=1 Tax=Clostridium sp. CAG:470 RepID=R7FHV5_9CLOT
Transketolase C-terminal section {ECO:0000313|EMBL:CDE14226.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
transketolase
L3_131_368G1_scaffold_74_29
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26789..27475
DNA (687bp) protein (229aa)
Cell division ATP-binding protein FtsE n=1 Tax=Clostridium sp. CAG:343 RepID=R6N448_9CLOT
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CDC05815.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
cell division ATP-binding protein FtsE
L3_131_368G1_scaffold_74_30
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27459..28370
DNA (912bp) protein (304aa)
Cell division protein FtsX n=1 Tax=Clostridium sp. CAG:343 RepID=R6N1D8_9CLOT
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
FtsX; cell division protein
Displaying items 1-30 of 139 in total

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